Gene detail

Detailed information of ENSDKPP00000028717.1 in Plumapathes pennacea

Genomic Location: not available for this species
NR annotation: CAH3195377.1, unnamed protein product, partial [Porites evermanni]
Species Plumapathes pennacea · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q17QQ4	Transcription initiation factor TFIID subunit 9 OS=Bos taurus OX=9913 GN=TAF9 PE=2 SV=1
Q16594	Transcription initiation factor TFIID subunit 9 OS=Homo sapiens OX=9606 GN=TAF9 PE=1 SV=1
Q5BKE0	Transcription initiation factor TFIID subunit 9 OS=Rattus norvegicus OX=10116 GN=Taf9 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007262 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02291 all species →	TFIID-31kDa	Transcription initiation factor IID, 31kD subunit	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003162 all species →	Family	Transcription initiation factor TAFII31	Interproscan
IPR051431 all species →	Family	Transcription initiation factor TFIID subunit 9	Interproscan
IPR009072 all species →	Homologous_superfamily	Histone-fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48068 all species →	TAF9 RNA POLYMERASE II, TATA BOX-BINDING PROTEIN (TBP)-ASSOCIATED FACTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006352 all species →	Biological Process	DNA-templated transcription initiation	Interproscan
GO:0000124 all species →	Cellular Component	SAGA complex	Interproscan
GO:0003713 all species →	Molecular Function	transcription coactivator activity	Interproscan
GO:0005669 all species →	Cellular Component	transcription factor TFIID complex	Interproscan
GO:0016251 all species →	Molecular Function	RNA polymerase II general transcription initiation factor activity	Interproscan
GO:0043966 all species →	Biological Process	obsolete histone H3 acetylation	Interproscan
GO:0051123 all species →	Biological Process	RNA polymerase II preinitiation complex assembly	Interproscan
GO:0046982 all species →	Molecular Function	protein heterodimerization activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14535	TAF9; transcription initiation factor TFIID subunit 9	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.