Gene detail

Detailed information of ENSDKPP00000037164.1 in Plumapathes pennacea

Genomic Location: not available for this species
NR annotation: KAJ7330778.1, transcription factor TFIIIB subunit brf1 [Desmophyllum pertusum]
Species Plumapathes pennacea · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8CFK2	Transcription factor IIIB 90 kDa subunit OS=Mus musculus OX=10090 GN=Brf1 PE=1 SV=1
Q92994	Transcription factor IIIB 90 kDa subunit OS=Homo sapiens OX=9606 GN=BRF1 PE=1 SV=1
P43072	Transcription factor IIIB 70 kDa subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=TDS4 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003281 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08271 all species →	TF_Zn_Ribbon	TFIIB zinc-binding	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013137 all species →	Domain	Zinc finger, TFIIB-type	Interproscan
IPR000812 all species →	Family	Transcription factor TFIIB	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11618 all species →	TRANSCRIPTION INITIATION FACTOR IIB-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000126 all species →	Cellular Component	transcription factor TFIIIB complex	Interproscan
GO:0000995 all species →	Molecular Function	RNA polymerase III general transcription initiation factor activity	Interproscan
GO:0001006 all species →	Molecular Function	RNA polymerase III type 3 promoter sequence-specific DNA binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006352 all species →	Biological Process	DNA-templated transcription initiation	Interproscan
GO:0006383 all species →	Biological Process	transcription by RNA polymerase III	Interproscan
GO:0070897 all species →	Biological Process	transcription preinitiation complex assembly	Interproscan
GO:0097550 all species →	Cellular Component	transcription preinitiation complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDKPP00000037164.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.