Gene detail

Detailed information of ENSFVQP00000012040.1 in Callogorgia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Callogorgia gracilis · all data for this species · gene families

Sequence

CDS

Transcript

ENSFVQT00000013423

ATCGATCTTGCGTTGACAAGTACTGCAACAATAGCGCCAGTAATCAGTGAGCGAGAAATCAATACTTCCCCTTTTTGTATCACTAGAAACAGGAATATTTCAGACAAACCTCGTTCCTGGATCATTCGCTATCCCGACAATGGAGTCGGAATCGCCGCTAACTGCTGCAGATGTCTATGAAACTGCGTCTGAAATTGGCAAAGACATTGAGCAGATTATCGAAAACTTCGGACACGATGTTGTCATGGACATCATGCCGAAGATCATCAAAGTTCTCGAGCAACTCGAAGTGACTGTGGGAGAGCAGGAGAAGAGCTGTTTGGAGATGGAAGAGATGAGGTTGCAGAACGAGAGATTGCTGACGGAAGTGAAGAAAGAGGCTGGTTTTCGACGCCGCCTTGACGAGGAGCTATTTCAGTATAAGCAAACTTCAACGAGAGAAATCACCGAACTGAACaatattttggaaaaattAAAGGATGAAAACCAAGCATTACAGGCTGAGGGGAAAGCTCATCACTTTGAAAAGAAAGAGGAAGCTCGACATCTATCTTCTGCTGATTTGGCCGTTCTTGAACAAATGAAAAGCACTATTGACAATCAACGTGACACCATCCGGTGTAAAAACATTGAAATTGAAAGTATTAGGCAGGATTTGGAGGCCATGGAAGAACAAGTGGAGCGGTTGGCAAACATCAACGAGACAATCCGACGTAACCTCACATTGCAAAAATCCAGGAACGCAACTTTAGTTCAGGAAAAGTCGGATTTCGAGGCCGACATCAAGGCTCTGAGACAGCGTTTATCAATGGGAATACCAAACAATGTAATAACTGTGTCGGAAAACACAAGGACGCAGTCTGTTGATATGACAAAACACGAAGAAAAAACTAAGAATGGAAACATGGGAACGGATGGGAAAGATCCAAATAGACCAAGGTTCACTTTAAAAGAACTTCAGCAAGTTTTGATGGAAAGAAACCAGTTGAAGGAAAAAGTTATCACTTTGGAAGAAGATTTGGCGTTCTACAAAAAATGCAGTGAGGACGAAGTGGATTCCGCATCTTTAGAAATACAAACGTCTCAACTGCATAATCCAaaggaaaaacaagaacatggAACACAGAAGTCGAGCATTTCAAAATTATTCAAGTTTTTGTGGAAGGAAGAAATGAAGACCTCAGTGAAACCTGGAGAGCCTATTGTGCTGGATAAAACCAAGGCATAGAGTCCCGTATGTCGGCAGGAAGCAAGTTAGGTTTACTAAACAATATGGCATGCAAAGTTGACGACGAAaatcagtttatttttttattcttacGCAAGCAGAAAGAAACAGGTGATTGATAATAACAGAGAGCTAAAGGAAACGAAAGCTGTGACGGTTTTTGGGGATTTTCATCTTTGAGAGGAAATCACGAGTAGGCCATTTTGTACGATGACGTTCGATGGCTCCAACtataccagaatgctttgcctgCAGCATCTTAGTGCCAATAAATAGAGGGTACTGGGCAAAGCATAACACCATTGTGCAAATACCTATTACGTCCatgttgttcttggttaagagTGCTTAATCTTCGATTTTTTaacttaattttaaattttcatataAAGCAAAGACGATgaatggtttaaaatttaaagacAAGGGTTACGACAAATACACTTTAACTCCCTTTAAACTCTAATTATCCCCagttatccgtggtttctccCAAAAATTTATTAAAGCTGGTCATCTAACACCGTCACTGTTCTCGTTGTTGAATGTTCTTCATGTCATGAAAAAATTAAGAACTTACCTTCACCGCTAAATAAGCAATTCAGACtgactactatatatatatatatctaaatccggaattttcagtattttgaatcCGAACAAAAAGTCCGGAGAAATGGCTCGCCTTTTGTAAACGGTCTTCGAGATGAGCTCTATTTTCAATCCGACGTGGGTCGGATCACTGATCGTGTAAACAGTCTTAGATGGATCCAAATACTTTTGTCACGTGTCAACTTAACACTACAGTTCTCCATAAACttggattaaatgagcacaccGTTCCCAGTAACTCCATAGCTCAACTGCATGGTAGAGCGGTAGACCGGCGTTTCgtgaaggtgcgagttcaattCCCGTTCAAGTcgacagtttttctgttgacatcAGCAGTGTAAGATAATCATAAAATTTTCTCTCTTCATGTTTTCCATAAAT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11461 all species →	RILP	Rab interacting lysosomal protein	Family	Interproscan
PF09744 all species →	Jnk-SapK_ap_N	JNK_SAPK-associated protein-1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR034744 all species →	Domain	RH2 domain	Interproscan
IPR039911 all species →	Family	JNK-interacting protein 3/4	Interproscan
IPR021563 all species →	Domain	Rab interacting lysosomal protein, dimerization domain	Interproscan
IPR034743 all species →	Domain	RH1 domain	Interproscan
IPR019143 all species →	Domain	JNK/Rab-associated protein-1, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13886 all species →	JNK/SAPK-ASSOCIATED PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005078 all species →	Molecular Function	MAP-kinase scaffold activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0008432 all species →	Molecular Function	JUN kinase binding	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0019894 all species →	Molecular Function	kinesin binding	Interproscan
GO:0030159 all species →	Molecular Function	signaling receptor complex adaptor activity	Interproscan
GO:0046983 all species →	Molecular Function	protein dimerization activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSFVQP00000012040.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.