Gene detail

Detailed information of ENSFVQP00000012131.1 in Callogorgia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Callogorgia gracilis · all data for this species · gene families

Sequence

CDS

ENSFVQT00000013528

ATGAACCAAAGGACTGTGAAGAACGCTGTGGTCGTGGACTACCAAAAGAGACGGAAACCGAGCAAACATTATGTTTATGTTATAAATGTCACCTGGGAAGACAACAGTGTGGTTGTCATCTACAGAAGATACAGCAAGTTATTTGAGTTACAGACAAAGCTATTTGAGGAGTTTCCTGAAGAAGGGGGTGTCAAAGATCCTTCAAAGAGATCCCTTCCATTTTTACCAGGAAAGATTATTTTTGGTCGAAGTAACATCCGTGATGTTGCAGAGAAGAGAAAAGAACCACTCAACGAGTACTGTCAGAGTCTTATCAAGCTTCCTGCCAAGATTTCAGGATCTGAACTTGTTCTTGAGTTTTTTGAACCAACAAATGAAGATGTTTCACCTGGTGAAGGAGAAGAACAgaaagataaaaagaaggGCAAGGATGAGACTGAGAGAGCTCAAATGATTACTGAGCCCATGCAACTAGAACAATACATCGTAATAGCGGACTATCAGAAGCAAAACCGAAGTGAAGTCAGTGTTCTAGCCGGAGATATCGTCGAAGTCATTGACAAGAACGAAAATGGCTGGTGGTTTGTGAACATGGATGAAGAACAAGGCTGGCTTCCTGCTTCGTACCTTGAACCGGAGGACGGCAGTGCGGAGAGCGCAATAAGTACTACTTACAAATTAGGAGaGGAGAGATACATTGCGTTAAGAGCTTACTCTGCTAACGAACCTGACGAGCTTGGCTTTCAAAAAGGCGTTGTCGTTGATGTGTTGCAGAAAAATGTGGACGGATGGTGGCTGATCCGGTTTAACAGCAAGGACGGTTGGGCTCCAGCCATATACTTGAAGAAACTTGATCCGACCCAGGCACTGCCCAAACCTCACGGCTACGAGAACGTGAACCTGGAGAATGAGCACGTGATTCCCCGGAAACCGAAAAGACAACGGAAAGAGAACGAAGGAAATCAGTCGAACAAGCCACCACCTCCTAGAAAGAGCTCTGTTCGAAAGTCCCATAAACTACAAAACCGCGTGCGAACTCCACCGTGTACGAACGGCAAAGCTTCTGTTTCGTCGCTAAACGAGACAGAATACGTTGCTCTATCTGAATACCGTGCTGCAGGAAATGATGGAAGACTGAGTGTCCAAGAGGGCGTCTCCGTTCAAATTGTCGAAAAGTCCCCCAACGGCTGGTGGCTTTGCAAGATCGGTAACGAAGAGGGTTGGATTCCGTCGTCGTACTTGAACCGCCAGGAAAAGAAATCGAAACCTCCCAAGCCAGCGCCGACCAAGAACCGATTCCCAGCGGCGAAGCCCGGAGCGGCGGCGGCTGCTCCCGGAGTGGAGTACGTCGCGATCTCGGATTACACCGACGACGACCGATTGAACATCTCGTTGAAGAAAGGCGCGCTGGTCAAGGTCGTGGAGATGAACCAGAGCGGCTGGTGGTACGTGGAGTCGCGCGGGGCCGCGGGATGGGCACCGTCGACGTATCTCGAAGAGAAGCCGAAGCCGAAGCCGAAGCCACCGCCGAAGGTGAACGTGCCGCGCCCCACGCCCCGGCCGGCTGTGCGACCCCAGGGCTCGCGACCCCCACCCTCGCGACCCTCGCCGCCCACGCGGCCGACGAACACGCGAACCGGTCAGCGGAAAGACGGCAGGAATGTTCCACACGCGCCACCGATTCCGAACCGAGTGAATAAGCCGTCGTTGAAAGATACGAAAGGTGCGTCGAGAACGAACGTAAGGTCTTCGGGAAGCATCGAGAATCTTTTGGAGAAGGTGCATTTGAAGCCCGCTGTGCCCTTGAAGCAGGCGCGAAGTGCCGACAACTTGTCGTCCGCAGGACACGAGGGAAGGCGAGGACCTGGGGGGCAGCGAGGGGCAGCAGCTCGACCTAGCAGCGTGATATATTTTGTGGCGATAGCGGATTATAGCGACGAAGATGAGGACACGATTGATCTGAAGAGGGGCGATATGCTTGAGGTGATTCAGCGCGACGAGGGGGGCTGGTGGCGAGCCAGATTGGGTAACCGTGTTGGCTGGGTGCCTTCAAATTATCTTGAGTTGCAATGA

Transcript

ENSFVQT00000013528

CGTGGGTACTTCCGGTCGGGTGCGGTTGACTAGACAAGAAGCTGACCCAAAGATTTCATTTCAAAGGCTTGCGTGGTTCATGAACGTTATATTTCTACGTTTTATCTAGAGCATGTCAAAGGTTAAGCCATGAACCAAAGGACTGTGAAGAACGCTGTGGTCGTGGACTACCAAAAGAGACGGAAACCGAGCAAACATTATGTTTATGTTATAAATGTCACCTGGGAAGACAACAGTGTGGTTGTCATCTACAGAAGATACAGCAAGTTATTTGAGTTACAGACAAAGCTATTTGAGGAGTTTCCTGAAGAAGGGGGTGTCAAAGATCCTTCAAAGAGATCCCTTCCATTTTTACCAGGAAAGATTATTTTTGGTCGAAGTAACATCCGTGATGTTGCAGAGAAGAGAAAAGAACCACTCAACGAGTACTGTCAGAGTCTTATCAAGCTTCCTGCCAAGATTTCAGGATCTGAACTTGTTCTTGAGTTTTTTGAACCAACAAATGAAGATGTTTCACCTGGTGAAGGAGAAGAACAgaaagataaaaagaaggGCAAGGATGAGACTGAGAGAGCTCAAATGATTACTGAGCCCATGCAACTAGAACAATACATCGTAATAGCGGACTATCAGAAGCAAAACCGAAGTGAAGTCAGTGTTCTAGCCGGAGATATCGTCGAAGTCATTGACAAGAACGAAAATGGCTGGTGGTTTGTGAACATGGATGAAGAACAAGGCTGGCTTCCTGCTTCGTACCTTGAACCGGAGGACGGCAGTGCGGAGAGCGCAATAAGTACTACTTACAAATTAGGAGaGGAGAGATACATTGCGTTAAGAGCTTACTCTGCTAACGAACCTGACGAGCTTGGCTTTCAAAAAGGCGTTGTCGTTGATGTGTTGCAGAAAAATGTGGACGGATGGTGGCTGATCCGGTTTAACAGCAAGGACGGTTGGGCTCCAGCCATATACTTGAAGAAACTTGATCCGACCCAGGCACTGCCCAAACCTCACGGCTACGAGAACGTGAACCTGGAGAATGAGCACGTGATTCCCCGGAAACCGAAAAGACAACGGAAAGAGAACGAAGGAAATCAGTCGAACAAGCCACCACCTCCTAGAAAGAGCTCTGTTCGAAAGTCCCATAAACTACAAAACCGCGTGCGAACTCCACCGTGTACGAACGGCAAAGCTTCTGTTTCGTCGCTAAACGAGACAGAATACGTTGCTCTATCTGAATACCGTGCTGCAGGAAATGATGGAAGACTGAGTGTCCAAGAGGGCGTCTCCGTTCAAATTGTCGAAAAGTCCCCCAACGGCTGGTGGCTTTGCAAGATCGGTAACGAAGAGGGTTGGATTCCGTCGTCGTACTTGAACCGCCAGGAAAAGAAATCGAAACCTCCCAAGCCAGCGCCGACCAAGAACCGATTCCCAGCGGCGAAGCCCGGAGCGGCGGCGGCTGCTCCCGGAGTGGAGTACGTCGCGATCTCGGATTACACCGACGACGACCGATTGAACATCTCGTTGAAGAAAGGCGCGCTGGTCAAGGTCGTGGAGATGAACCAGAGCGGCTGGTGGTACGTGGAGTCGCGCGGGGCCGCGGGATGGGCACCGTCGACGTATCTCGAAGAGAAGCCGAAGCCGAAGCCGAAGCCACCGCCGAAGGTGAACGTGCCGCGCCCCACGCCCCGGCCGGCTGTGCGACCCCAGGGCTCGCGACCCCCACCCTCGCGACCCTCGCCGCCCACGCGGCCGACGAACACGCGAACCGGTCAGCGGAAAGACGGCAGGAATGTTCCACACGCGCCACCGATTCCGAACCGAGTGAATAAGCCGTCGTTGAAAGATACGAAAGGTGCGTCGAGAACGAACGTAAGGTCTTCGGGAAGCATCGAGAATCTTTTGGAGAAGGTGCATTTGAAGCCCGCTGTGCCCTTGAAGCAGGCGCGAAGTGCCGACAACTTGTCGTCCGCAGGACACGAGGGAAGGCGAGGACCTGGGGGGCAGCGAGGGGCAGCAGCTCGACCTAGCAGCGTGATATATTTTGTGGCGATAGCGGATTATAGCGACGAAGATGAGGACACGATTGATCTGAAGAGGGGCGATATGCTTGAGGTGATTCAGCGCGACGAGGGGGGCTGGTGGCGAGCCAGATTGGGTAACCGTGTTGGCTGGGTGCCTTCAAATTATCTTGAGTTGCAATGATTTTTAACAGGGGAAAACATTTTggtggggggagggagggTGGTGGATCGTGGGGGTGGTAGGTGGATGACGGGGGATGAGTGGGTGGTTGGCTTATTTTGAATGCATCATGACTTTGGTATATACTTTAAATTATGCTCCGTCTCCAAAGCGGAATTCTTgtatttataatatacataattaataataatgctcttttttaataattttatttttatgagaaacttttttgttgttgatgCTCAGCTCCATGTGATGGCAAGCCGTGAAGAAAACGCTTCAGAACCGAGAGCATGTCGTTCATCATCTTCAGCGAACCTGTTGAACGAACAGGCCGGTATCCATAAATTGACATCGCCTTCATTTGGACTTTGAACTGCTCTACTGAATGAAGGCtgctttccagtgatgcgttttttcgacctacgtatacgtacagagtgctcagaacacgtaaactcggtTGATGGCTGGAGTTCTGATGTGGATGGGC

Protein

Gene family

Family type	Membership / link
Ubiquitin family	UBD\|Other\|SH3 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00018 all species →	SH3_1	SH3 domain	Domain	Interproscan
PF00787 all species →	PX	PX domain	Domain	Interproscan
PF07653 all species →	SH3_2	Variant SH3 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001683 all species →	Domain	Phox homology	Interproscan
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR037961 all species →	Domain	SH3PXD2, PX domain	Interproscan
IPR051228 all species →	Family	NADPH Oxidase and PX Domain-Containing	Interproscan
IPR036871 all species →	Homologous_superfamily	PX domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15706 all species →	SH3 MULTIPLE DOMAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0035091 all species →	Molecular Function	phosphatidylinositol binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016176 all species →	Molecular Function	superoxide-generating NADPH oxidase activator activity	Interproscan
GO:0042554 all species →	Biological Process	superoxide anion generation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24032	SH3PXD2; SH3 and PX domain-containing protein 2	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.