Gene detail

Detailed information of ENSFVQP00000015366.1 in Callogorgia gracilis

Genomic Location: chr2:46857045...46872434
NR annotation: no NCBI-NR hit recorded
Species Callogorgia gracilis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

ENSFVQT00000017028

ATTTAATGGCGTGCTCGATGGAAAGTTtctatttataaaaatactgGATTGTTGTGTGTAAAGAATCTGTTAAAGATGTCAGGTGAACGGCGGcgtcaaaagaaaaatttggAAGGACTTCTTAAATTCTGCGTTGAAGGTACAGCAGCAGAGGATACTACAACCAATTCTTCCAAGTTTGAAGAAATGGACGATGAGAGAAAGCAATGGTTGCAAGAAGCAATTACATCTTTTACAAACAATGATGAAACAACACTTATAAAAAAGTGTTTAGAAATTTTATCAAAACCCATTGGAACATTATCATCAGATGAGGAAGGTGATCTTATGACAAGAGAGAATGTATTTGAGCAGCTTGAAACTGTTGTTGATATTATTGACAATGCTAAAGatTGTTACAAGCTTGGAGGTTTTCagattttgttaaattatCTTGATAGTAGTCATACCTCGTTACAATGGAGAGCTGCTTCTGTTCTTGGACTATGTCTTCAAAATAACACTTATTGTCAAGATAAAGCTTTGCAGCTAAACCTCATACCAAAACTTCTAGTACTTCTTGACTCAAAAACATCAGATGAGCAAGTTAACATTAAGTCATTGTATGCTTTGGCCTGTCTCATCAGAGGGCATAGCGAAGCtgaaaaaacatttgtgaTGCAGAATGGGTTTTCATGTCTATTAAGAGCATTGCAACGGAACATTCCAAAGTTAACTGTAAAGAGCATTTTTCTTTTATCAAACCTTATTGATGGCAACCAGGAACACATagaaaCTCTGTTCAACATGGGCTTGGTGGAACAGTTAGTCTTTATCATTCAGCGTCCTCACGAACAATATCATGAACATGTTGTTAACATATTGGTGAGGTTTGTTACTAATTATCCTGCAGCACTTCAAGATTGCAGACAAGAAAAATATGGTTTAAGAGAAACACTGAGCCAACGTAAACAATATTTAGAGAAGGAAGATCCTGAGGCATttgaggATGAAATAGATCATTGTGACAAACTTTTAGCATTTTGTTTCAATGAAGCCATTTCAGGTAGTCAAGAAGCTACAGAAAAATAGACTTAAGGATATTGCACAAAAAGATCATGAGACAGGCAAGAAGTACTGTGCTTTATACAGCAGttaagtatttttttataaacagacatacctgtactgtacagtGCTTTATGTAGACTCCTACATGTACAGAAAACTTGTACAAAACTAGTTAGCTAAGAATAAAAATGTGTATTGTTCACTATAACACAATGTTCATTGTAATAGAAGTTATACAacttgtaaacaaaataagaCAATAAGAAGTAAGCATACAGATAGTGTGCACTACGTACAGTAGGtggtgttcagatacaaattgaaatataaaaagttggtgtactgcccatataaaaagcaaaatctaacatttcaagTGTATAGGCCTTAATtctcagagagaaacaaaaaatggaCCTTATgctagaaacgttagacttcaagTTCTATATTGGCAtactacactaaccttttgtatttcgatgtGTAGATACAGTAATAAGAATCCTCCCACCTTTGTATGCAGTTGCTAAAAATTCTGGTGATTAGCCCCTTAGCCTATAATAAGCCATTCCAGTTGTTTATAAGGCTAATCTTTCTGCAAAAATGTACTGGAGTGTATAGCGTAGTGACATATCCAATCTGAATATGTACATCATATTTAAGCCTTGTCATAagaccataaaaaaaaaactctttaaACTTATGGAGTTGTACAGATTCCAGCAAGGAGTGAATAAAATTGTATTCATATAAAATATGCCCACTTCTCTTACTTAAAACGTAATCTTAAAATATGatggaaatttattttttcctcAGTAATCAAGCATCTGACACTACTCACTTACTGTGCTAAAAATATCAATTTCTGAGTTAGCTAATTCACTTTGATCAGCTAAGCCGCTTGTATCTTCTTTAGGACATGAAATACAAA

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006846 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08609 all species →	Fes1	Nucleotide exchange factor Fes1	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR050693 all species →	Family	Hsp70 Nucleotide Exchange Factors and Inhibitors	Interproscan
IPR013918 all species →	Domain	Nucleotide exchange factor Fes1	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19316 all species →	PROTEIN FOLDING REGULATOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000774 all species →	Molecular Function	adenyl-nucleotide exchange factor activity	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09562	HSPBP1, FES1; hsp70-interacting protein	-	Chaperones and folding catalysts	ko03110	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.