Gene detail

Detailed information of ENSFVQP00000016146.1 in Callogorgia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Callogorgia gracilis · all data for this species · gene families

Sequence

CDS

Transcript

ENSFVQT00000017915

gtcagtttGTAAATTTACATCAACGGCAATCATCTTGAACAAGAAAGAGAAAGGAAATTAAATGGTTTATTAtgcctttgaattttgatataaTTTCACTATAAACGGAGTTAATTCACATGCAGAAAGTGGAACATATTCAAGCAGAGGCGAATTAATTTATGAAGGTCATGCACAGTGATTCATTGGATGACAGCTTAACTAGCATTCAATGGCTTTGTCAATTGGAATCTAAAAAGATCTTGGAAGATGACATGTCTGCAATTTCTGACAGGAAGAATGAGATTCGAGCCCAGGCTGTCACACAACAACGACAGCAGCGACAGCAGCAGCAGGATGACATCGATAAAAATCCATACCCTAAACCGCATTATTCCTATGCCACTCTGATCGTGTTTGCAATCAACAGTTCAAGGGAGAAGCGAATGACTTTGCAGGAAATCTATGCGTGGATTGAGGAGAACTATCCTTTTTACAAGTCTGCCAAGAAAGGATGGAAGAATTCCATTCGCCACAACCTGTCATTGCACAAATTCTTTGTGAAAGAAAAACGACCGAGCGTGCTGCACGGCAAAGGCAGCTACTGGAGAATTTCCCCGGAGGGAAAAGAGAACCTCATGCGGGACCTGATGAAGCAATCGCAGAACCTCCGACCGCCGACCGCTCTCTTGCCCCACGACCCCAATCGCAAACTACGTCCGATCATGCCGAAACCCACCAAAGAGCTGGAGTCGAGCAAGGTTCACTACGTGCCCTATCTTGCTTGCAACCTGCCCATTGTGTTCGTCCCCAGTACCTCTATGTTCGCGCCAGAAAGTTGCGCGGAGGCAGACACGCGTGGGGCTCCCGTGTTTTCCTCGCCCGAAACACAGACTGGTGTCGTCTCGTTCGTGGAAGCAAAGGCTGGTTCTTCGGGGCGATCAAAGCCAAGCAACGTATCCTGCGAGTCCTCGACATGTTCCGTCATGTCCCATGGTGATCCTACCACGTCACACGGTGATCCTACCATGTCCCCTGGTGATCCTAGAGCGTCTCGCGGTTGGACGTTAAAAGGGGGAAGTGCGAGTCACGGCACCACGACCGTGTGCCACGGCCATACACGGACCAGCAGCGCGTCCTCGACAGGTCCCGTTGTGTCCCCGGGAGATCCCAGAGTGCCCCATTGTAATCCCACCGTATCCCACGGTGATCCCACCTTATCCCGCCGTAAGGTGTTAAAAAGGAAAAGCTCGACGAACGCCCACCAGGGCCAGGCCAGCAGCCCGTCGTGGAACGTCAAGAAAAGAAATGGTGACAACCATGTTTCGAGCAGTCGGAGAACCGCAACGAAAAGTCCGACGAATTCGAAACAACTGCCAAATATTTTACGCCGCAAGAGAAAGACCCAGGCGAGCTCTCCCGCGGCCATCGTCCGCACTCCGCCGAAGTCCACGGTCCAGTCGACTTTGGCTGCTATCAACTCGACCGTCCAAGTGGCCGCCTACTCGCCAAAGTTCGGCTACGACGACTTCGTGAGCAGCCTGGCCGAGCTCACCTCGTCGCCTCTCGGACACAACGCTTACGACTTCCTGCCGAATGGCTTCGGCAGTCCGGGATTTTCACCCCTTCGTTCGCCGCTACGGTTCGGCGGCCATGTGGGTTTCACTCCCCCTGCGGGTTTTACCCCGCTGAAGCAGGAGGCCGACAGCGGCATCATAGTGACGCCTGTGAAAGGATTTGGGGACTTGAGTTTCAACTGGACTCCGTTTAAAACCGGAGTAACGTCGCTCATCCAGAGCCCGCCGAAGAATGAGCTCGCTAGTTGCAGTGGTTCCCAGGGCTGCAGAAAGTCGCTCGGTTTAGACAAAGTGAACGAAATTAGCGACGAGTCGTGTGGAGCCGGCGGTAGCTGGTAAAATTCGGGACAGCGGATTTTCCCGCAGTTCTAATTGACAATAATATAAATGAGAAATTTCTATTTAAAGACGCGTGAATTTTGAATGCCGCACTATAATCAATATTAATTCGAATAAAAATGCAGCTTGGTGAATTTACATGGTTCACTTATTCAAGTTTGGTTTTGGTGTGTATTTAGGTACCGGACTGATTATTTTCAAAAgctattaataattcatgaagaaatcCATGTTTGCTTCCCATATTTTATCTCCCTGAattatgtgaaaaaaaatacattcgaAAGAAACTCTTTTGTTACCTTGGTTGCAGAGGATCTCGTGTTGAAAGAAGACGATGCGGAAAAGAAGATTGAGAATCTCAATATTTA

Protein

Gene family

Family type	Membership / link
Transcription factor family	Fork_head · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00250 all species →	Forkhead	Forkhead domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR001766 all species →	Domain	Fork head domain	Interproscan
IPR036390 all species →	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR030456 all species →	Conserved_site	Fork head domain conserved site 2	Interproscan
IPR045912 all species →	Family	Forkhead box protein J2/3-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46078 all species →	FORKHEAD BOX PROTEIN J2 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0043565 all species →	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSFVQP00000016146.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.