Gene detail

Detailed information of ENSFVQP00000017469.1 in Callogorgia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Callogorgia gracilis · all data for this species · gene families

Sequence

CDS

ENSFVQT00000019538

ATGAGTGCTACCGAAATACATATCGAGTGTCGACGGCGACTTCCCATAGCCCCGCGGAATTCTAATTTGAAAGGAGTATCAGGCGAAGTACGTAGCCACGCCAGGTCGCTTCCTGTGCCTGTGGAATTCACCCGAAGTCAAACAATGGATATCCTACCCAAGAAACGACTTACGCCTGAAGTTGTCGCTACACTGCTGTCGATGGATCTCGCTTCAGAGGGCAATTCATTGGCGACTTATCAAAAGAAAGGGCTAGGCGACGTTCCTTCGAGGGTATCCGATGATAATCCAGCTCGAGGTACGCGAATGTCTAGCTCAAAACGGCTAACTTCGCGAGACAACATCGGCGTAGTTGAAATAGTAAAGAGTTCAGGACAACCTTTGGGGTTTTCATTAAGAGAGTACAACGACAGCCAGTTCGAGAAGCCTGGTGGGATATTTGTGTCGCGGCTAACAGCCGGCGGTGTTGTGGAACAGAATTCATTGCTCCATGCTGGTGATGAGATTTTGGAGATCAACAACGTCACCGTACATGGTTACAAACTAAGCGATGTCGTGGCCATGATTCAATTGCCAAGAAGACTCGCGCTGAAGGTACGATTTCGGGGAAATCATCACCAGAGCAGTGTCGAAACGCAAAGAAAATTCACGGAAAACCCAACACTTGGTATCAACAATAACATCTACGACGCCGACAAAACAGGCAAGAACCGGGGCGCCGATAGCAAAAGTAGGCATGAATTACGAGAAGGTGGACCTAATTTAGCCCAAAGACAAATGGGAACTTACGGACAAACGAGAACTTGTATTGATGGCGTTTCTGCGCCAAACGCTTTGAACGTCCGGCGCTCTTCCGACATCTGTTTGCGTTCGTCAGGGAGAATTCTCCCTGCACCACCAGAATCAGAttcagaaacaaacaaacctcgAAATTCGCCCAGATTTTCAACAGAGGTACTGCAAGCCGAAGCTAGCCAGCCGAAACTGAACCCAAATTTGATGTCACAGAACCAAAAAGGAGAATCCGCAATTGCGAGTGGAACCAAACGTAAAAATCATAGAAGGTCAGCTGCCGTTCTTCCTGTCTCAGACGGAAAATCACCAAATTCGCAGTTCCAAGGGAATCCCGATCACTTTCCGGAAACTGGCGAAGTTGCTGGAAAACGCGTGGATCCTGGAGACATAAAATTCGACATTGTGCCATCGTCGCCGAGTGGCGCGAATTTTGGTCCTGGTGTAATTTCTCGTACGTACGAAGTTCAAGGCGGTCATTCAAATCGAGATTGTACGCCGACATCTTCACCCGTGGCCCCTCGTTCGATTAAGACTGATACCACTCTCCAGACCTTTGACTCGAGTTCTTCGCTGTCCAGCTCCGACTCCCCGAAAAGTCAGTACCGAGGGCCGTTTCTTGGAAAACCACGAGCGGGGGATACAGCTCGACTGTCCCGTTCCGAGCTGAGGGCGCACTCGTCGTGCCCCTCTATCGACGCTAGCCCGGTGAGTTCGTCGGCTGAAACGGAGGAGCAGTTAAGTAAAAGTAAGAATACGTGTAGTGATGGAAGCAAACAGCAGAGACCACCTTTACTTTTGCATTCTGTTTCGTCTGACGAACTGAACCAATCACACAACAGTTGGTTTGCGAAAATCGGTAATCAAACACGCAAGCACGTTCGTAAGTTCTCAGAAGGCACTCAGCTGCGTGCACCAAAAGGTGGAGATGTCTATCGCGTTCCCCCGGAACTCACCGATGTCCCAACTGATGACATTGAACCTGGTTACAGGCCGTATCCGGGTCGCGGGGTTTGTGGCAGAAATGAGAACAATAGGAACGCACGCGCAGTAACAGGGATGCTTGTCTTGCATATCGTGAAAGGATCTAGAATCACACCGGGCGAAACCGCCTTGAAGGAtaaacgaaaaaaaatcaagctGTTTTGCACGGTCGATTCCGACGGGATTCGCCAAGCGTGTACCTGTACCAAGAAAGGTCTGAATAACTTCCAGTGGAATGAGAGTTTCGAGATCATGTTTCAGCGCACGCGAGAGATTAATTTAACAGTGAACATGCGCTCGAAGAAAGACGGAGATCAAACGTTATCGCGAGGCTCTCTGTGTCTCGCGCAGCTGTTAAGTGAAGGTGGCGAGCATGTACTGGCAGTGAATCTTGATCCAGTCGGAATGCTCTACGTTCGATTGCAATTCGCGGACATGAAACTGTTGCTACAGCGCACGCCTTCGCAAAAGAAGGAGGGTATCTTTGGTTTCTCGCTAGAAGCCGTGTTACGCCGCGAGAACTCCAGGATTCCCGCCATCGTGAGAAAGTGCGTGGAGGAAATCAATCGACGTGGTCTCGAGGTGACGGGTATCTACCGTCTGTGTGGCAACGCTGCCAAGAAAAGAACACTGCGAGCCGAGTTTGAGAACAACAGCGCAAACGTTGTCCTGGACCAGAATGAGAATCTTGTCGACGTAAACGTTATCACCGGATTGTTAAAGGACTACTTGCGAGAACTGCCAAGTCCACTCCTCTCCGAGAAAGTCCGAGAGATGCTTTGCGAAGCGTTAGCAACGGAAACGCGTTGTGAGTCGAGCGAACGGTTCCTCGTCAAAGAGATAGCGAATACGTTCGCCGCCACGTCGAGGGACACCATTATGTACTTATTAGATCATTTTGCAGCAGTGCTGATGAACAGCGACGTTAACAAAATGGATAGCCATAATTTAGCCGTTTGTATAGGACCTGTACTACTCTGTCCCTCTCTTGGTGCCACGTCCAGTGACACGTTGAGCGACACAAAGAAGGATATTAGCGCCATCAAGTTATTACTGGAAATTTGGCCGAAACCAGAACAGGTTTCTGCTTGCTAG

Transcript

ENSFVQT00000019538

ACCATGACCTTTTACAAAGGGCAAATGGTGATTTAATGCATTGTTATCTCAGTTCATTCACTGGTGTCACTGTGTGTTCAACTCTGATGAATCCCGTCTAGTTAATCCATTAATACCGTCGTCAAACAACAAACGGTATTATTGGTTCTTTCGCTAAGTTAATTATACTCCAGTGGTTTCTAATTACTCTTCTCTGTTGTTGTCTCGCTGTAAACGACGCCGTGgatatttcgttcgtcaactcacgactataaaaatgcatttaaacCTGCAGCTTGTCAAGGGTAGGAGAGCAACTCATGAGTGCTACCGAAATACATATCGAGTGTCGACGGCGACTTCCCATAGCCCCGCGGAATTCTAATTTGAAAGGAGTATCAGGCGAAGTACGTAGCCACGCCAGGTCGCTTCCTGTGCCTGTGGAATTCACCCGAAGTCAAACAATGGATATCCTACCCAAGAAACGACTTACGCCTGAAGTTGTCGCTACACTGCTGTCGATGGATCTCGCTTCAGAGGGCAATTCATTGGCGACTTATCAAAAGAAAGGGCTAGGCGACGTTCCTTCGAGGGTATCCGATGATAATCCAGCTCGAGGTACGCGAATGTCTAGCTCAAAACGGCTAACTTCGCGAGACAACATCGGCGTAGTTGAAATAGTAAAGAGTTCAGGACAACCTTTGGGGTTTTCATTAAGAGAGTACAACGACAGCCAGTTCGAGAAGCCTGGTGGGATATTTGTGTCGCGGCTAACAGCCGGCGGTGTTGTGGAACAGAATTCATTGCTCCATGCTGGTGATGAGATTTTGGAGATCAACAACGTCACCGTACATGGTTACAAACTAAGCGATGTCGTGGCCATGATTCAATTGCCAAGAAGACTCGCGCTGAAGGTACGATTTCGGGGAAATCATCACCAGAGCAGTGTCGAAACGCAAAGAAAATTCACGGAAAACCCAACACTTGGTATCAACAATAACATCTACGACGCCGACAAAACAGGCAAGAACCGGGGCGCCGATAGCAAAAGTAGGCATGAATTACGAGAAGGTGGACCTAATTTAGCCCAAAGACAAATGGGAACTTACGGACAAACGAGAACTTGTATTGATGGCGTTTCTGCGCCAAACGCTTTGAACGTCCGGCGCTCTTCCGACATCTGTTTGCGTTCGTCAGGGAGAATTCTCCCTGCACCACCAGAATCAGAttcagaaacaaacaaacctcgAAATTCGCCCAGATTTTCAACAGAGGTACTGCAAGCCGAAGCTAGCCAGCCGAAACTGAACCCAAATTTGATGTCACAGAACCAAAAAGGAGAATCCGCAATTGCGAGTGGAACCAAACGTAAAAATCATAGAAGGTCAGCTGCCGTTCTTCCTGTCTCAGACGGAAAATCACCAAATTCGCAGTTCCAAGGGAATCCCGATCACTTTCCGGAAACTGGCGAAGTTGCTGGAAAACGCGTGGATCCTGGAGACATAAAATTCGACATTGTGCCATCGTCGCCGAGTGGCGCGAATTTTGGTCCTGGTGTAATTTCTCGTACGTACGAAGTTCAAGGCGGTCATTCAAATCGAGATTGTACGCCGACATCTTCACCCGTGGCCCCTCGTTCGATTAAGACTGATACCACTCTCCAGACCTTTGACTCGAGTTCTTCGCTGTCCAGCTCCGACTCCCCGAAAAGTCAGTACCGAGGGCCGTTTCTTGGAAAACCACGAGCGGGGGATACAGCTCGACTGTCCCGTTCCGAGCTGAGGGCGCACTCGTCGTGCCCCTCTATCGACGCTAGCCCGGTGAGTTCGTCGGCTGAAACGGAGGAGCAGTTAAGTAAAAGTAAGAATACGTGTAGTGATGGAAGCAAACAGCAGAGACCACCTTTACTTTTGCATTCTGTTTCGTCTGACGAACTGAACCAATCACACAACAGTTGGTTTGCGAAAATCGGTAATCAAACACGCAAGCACGTTCGTAAGTTCTCAGAAGGCACTCAGCTGCGTGCACCAAAAGGTGGAGATGTCTATCGCGTTCCCCCGGAACTCACCGATGTCCCAACTGATGACATTGAACCTGGTTACAGGCCGTATCCGGGTCGCGGGGTTTGTGGCAGAAATGAGAACAATAGGAACGCACGCGCAGTAACAGGGATGCTTGTCTTGCATATCGTGAAAGGATCTAGAATCACACCGGGCGAAACCGCCTTGAAGGAtaaacgaaaaaaaatcaagctGTTTTGCACGGTCGATTCCGACGGGATTCGCCAAGCGTGTACCTGTACCAAGAAAGGTCTGAATAACTTCCAGTGGAATGAGAGTTTCGAGATCATGTTTCAGCGCACGCGAGAGATTAATTTAACAGTGAACATGCGCTCGAAGAAAGACGGAGATCAAACGTTATCGCGAGGCTCTCTGTGTCTCGCGCAGCTGTTAAGTGAAGGTGGCGAGCATGTACTGGCAGTGAATCTTGATCCAGTCGGAATGCTCTACGTTCGATTGCAATTCGCGGACATGAAACTGTTGCTACAGCGCACGCCTTCGCAAAAGAAGGAGGGTATCTTTGGTTTCTCGCTAGAAGCCGTGTTACGCCGCGAGAACTCCAGGATTCCCGCCATCGTGAGAAAGTGCGTGGAGGAAATCAATCGACGTGGTCTCGAGGTGACGGGTATCTACCGTCTGTGTGGCAACGCTGCCAAGAAAAGAACACTGCGAGCCGAGTTTGAGAACAACAGCGCAAACGTTGTCCTGGACCAGAATGAGAATCTTGTCGACGTAAACGTTATCACCGGATTGTTAAAGGACTACTTGCGAGAACTGCCAAGTCCACTCCTCTCCGAGAAAGTCCGAGAGATGCTTTGCGAAGCGTTAGCAACGGAAACGCGTTGTGAGTCGAGCGAACGGTTCCTCGTCAAAGAGATAGCGAATACGTTCGCCGCCACGTCGAGGGACACCATTATGTACTTATTAGATCATTTTGCAGCAGTGCTGATGAACAGCGACGTTAACAAAATGGATAGCCATAATTTAGCCGTTTGTATAGGACCTGTACTACTCTGTCCCTCTCTTGGTGCCACGTCCAGTGACACGTTGAGCGACACAAAGAAGGATATTAGCGCCATCAAGTTATTACTGGAAATTTGGCCGAAACCAGAACAGGTTTCTGCTTGCTAGACCTACTCTTCCATGAAACCTTGTAATAAAAGCAATAAAAAGATGATTATACTTCTGATTCCCCaataaacttttttt

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00620 all species →	RhoGAP	RhoGAP domain	Domain	Interproscan
PF00595 all species →	PDZ	PDZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR001478 all species →	Domain	PDZ domain	Interproscan
IPR008936 all species →	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR000198 all species →	Domain	Rho GTPase-activating protein domain	Interproscan
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR036034 all species →	Homologous_superfamily	PDZ superfamily	Interproscan
IPR052118 all species →	Family	Rho GTPase-activating regulator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46150 all species →	RHO GTPASE-ACTIVATING PROTEIN 100F	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0016477 all species →	Biological Process	cell migration	Interproscan
GO:0046578 all species →	Biological Process	regulation of Ras protein signal transduction	Interproscan
GO:0097060 all species →	Cellular Component	synaptic membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20655	SYDE; Rho GTPase-activating protein SYDE	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.