Gene detail

Detailed information of ENSFVQP00000017560.1 in Callogorgia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Callogorgia gracilis · all data for this species · gene families

Sequence

CDS

Transcript

Protein

Gene family

Family type	Membership / link
Ubiquitin family	ULD\|UFD\|RAWUL · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 activity RING\|RING · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00097 all species →	zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan
PF16207 all species →	RAWUL	RAWUL domain RING finger- and WD40-associated ubiquitin-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018957 all species →	Domain	Zinc finger, C3HC4 RING-type	Interproscan
IPR032443 all species →	Domain	RAWUL domain	Interproscan
IPR017907 all species →	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR001841 all species →	Domain	Zinc finger, RING-type	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10825 all species →	RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0000122 all species →	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0035102 all species →	Cellular Component	PRC1 complex	Interproscan
GO:1990841 all species →	Molecular Function	promoter-specific chromatin binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11460	PCGF2, RNF110; polycomb group RING finger protein 2	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.