Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Callogorgia gracilis · all data for this species · gene families
| CDS |
| ENSFVQT00000020911 |
| Transcript |
| ENSFVQT00000020911 |
| Protein |
| ENSFVQP00000018519.1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01909 all species → | NTP_transf_2 | Nucleotidyltransferase domain | Domain | Interproscan |
| PF03828 all species → | PAP_assoc | Cid1 family poly A polymerase | Family | Interproscan |
| PF06220 all species → | zf-U1 | U1 zinc finger | Domain | Interproscan |
| PF00076 all species → | RRM_1 | RNA recognition motif | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036236 all species → | Homologous_superfamily | Zinc finger C2H2 superfamily | Interproscan |
| IPR000504 all species → | Domain | RNA recognition motif domain | Interproscan |
| IPR000690 all species → | Domain | Matrin/U1-C, C2H2-type zinc finger | Interproscan |
| IPR012677 all species → | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR002934 all species → | Domain | Polymerase, nucleotidyl transferase domain | Interproscan |
| IPR043519 all species → | Homologous_superfamily | Nucleotidyltransferase superfamily | Interproscan |
| IPR035979 all species → | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR002058 all species → | Domain | PAP/25A-associated | Interproscan |
| IPR013085 all species → | Domain | U1-C, C2H2-type zinc finger | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12271 all species → | POLY A POLYMERASE CID PAP -RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| GO:0016779 all species → | Molecular Function | nucleotidyltransferase activity | Interproscan |
| GO:0006378 all species → | Biological Process | obsolete mRNA polyadenylation | Interproscan |
| GO:0031123 all species → | Biological Process | RNA 3'-end processing | Interproscan |
| GO:1990817 all species → | Molecular Function | poly(A) RNA polymerase activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K18709 | TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase | EC:2.7.7.19 EC:2.7.7.52 | Messenger RNA biogenesis | ko03019 | deepkoala |
