Gene detail

Detailed information of ENSFVQP00000019704.1 in Callogorgia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Callogorgia gracilis · all data for this species · gene families

Sequence

CDS

Transcript

ENSFVQT00000022294

GGATAATTTTCCGCTAAGTCTTGTGATCCCTATTTTCTGACGTCACCAAAATGAAATGTCGAGAGAAAGAGGACTAGGAACTAGTTTGGTAAACAATATGGCGTCTTCTGTGGAGATACAAAACCAGGCTTTATCTGACGAATCTGGAGAAGATTCTGATGAAGAGCTTCAAAGGGCATTTGCTTCTGGTAAAGTCAAACCTGGCCTGAATCACGTGGTTGaagacgaaaagaaaatttatgTTAACAAAGTGcctgaaatgaaagaaaagtTGAGTCTACTAAAGCTGGAGATGGATTGGCTTGAGAGACTTGACGTTACTTGTGATGTTGAAAAACAGGATGAGAAAAACAGTGATAGTGGAAAAATAGCACAACAAGATGATTTCAAAAGAGAGATGAAATTCTATAAACAGGCACACATGGCAGTTTCACAAACATTACCTAAGATTAAGAAGCTTGGTATTCCCATTGTTAGACCAGTGGACTACTTTGCTGAGATGGTCAAAACAGATGATCATATGcaaaagGTTAGGCAAAAACTGTTAAGTAAAGAGTTGTCCATGGAAAAGTCGGAGAAAGCGAAGAAACTGCGAGCCATGAAGAAATTTGGTAAAAAGGTGCAGCAGGAGGTGATTCAAAAAAGACAACAGGAAAAGAAACAAATGTTGGAGTCAGTTAAGAAATTTAGAAAAGGACAGAGAGGTAAGCCAGAGTTTATGCAAGATGGTGGCGATGACGAGTTTGACGTCAGTACAGAAAGGGGCACGAAGAGAACTGCCCAGAACAAGGCAACAGGGAAATCCGTTAAACGACAAAGAAAGGATGTGAAATACGGTTTCGGAGGTAAAAAACGAAGCCAGAAAAGAAATACAGCAGACAGTGCTGCCGACATGAGCTCGTTTAGTTCAATAAAACACAGCAAAGCACCGAGATCCAATAAGCAAAAGAACAAGCGTCTGGGAAAGTCAAGAAGACAGAAAGGAAAGGGAAAGTAAAACATCGTTGAGAATATTCTTGGACGTGCTCATGTTCTTCTGACGAGTTCCACCCTGTGTTGGTGCACAACAGCCCTATAATACTACGACGGGAACATTCCTGAAACAACTTCGAAGAAATTGAGGaattgaaaaaacaaaacttcaGATGGTGATGCATTGCAATACTTGATGAGATGGAATCGTGGAAAATGTTGCcaagttgttttgttttttgtatttctttatttttcgaGACTGTGAACTGTTTCCGCGTGTCCAATTTAAATCGCTAACTACAGGAGGATTTCCAAAAGCACACGTGACATCGAGGACGACCTCTCTTGACATATAatgcaataaacgttgtgtgctgcgtagccacgcagtgttgaaatacaaatcgaaatataaaaaggttgctgGTACTGTCGATGTACATATAcggaaagcgaggtctaacgtttcgagaaaaggcccttcgtcagctcgaaacgttagacctgaCGAGGGAccttcgcttgaaacgttaaacctgACTAGAgaccttcgctcgaaacgttagacctgaCGAGGGaccttcgctcaaaacgttagacctgaAGAGAGACCTTCGCTTGAAACGATAGACCTGACGAGGGACCTTCGCTTGAAACGATAGACCTGACGAGGGAccttcgcttgaaacgttagacctgaCGAGGGACCTTCGCTTGAAACGATAGACCTAACTTTCcatatatcagcagtacaccaaacgtGTACGGAAAATGAATGGCATTCATACATTTTTGAAGCTTCAAAACTTTGGTTGGTGTCGAGCCCATGCGCACTTGTTGTGGCAGTCGATTGTGTATGGCATCATGACTGGGGACTTGTGGCATTATGACAGGGATAGTTTGTTGCATATCGTTGCGCATTTTGGCACCTACCCTCCAAAATACATATTGGGGAGAAGTTAATCAGTTAATATATTTGGTAGTAAAATACCTGAATTCCCTTCAGTTTTGGTCACGTTTT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05890 all species →	Ebp2	Eukaryotic rRNA processing protein EBP2	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008610 all species →	Family	Eukaryotic rRNA processing	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13028 all species →	RRNA PROCESSING PROTEIN EBNA1-BINDING PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0006364 all species →	Biological Process	rRNA processing	Interproscan
GO:0030687 all species →	Cellular Component	preribosome, large subunit precursor	Interproscan
GO:0034399 all species →	Cellular Component	nuclear periphery	Interproscan
GO:0042273 all species →	Biological Process	ribosomal large subunit biogenesis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14823	EBP2, EBNA1BP2; rRNA-processing protein EBP2	-	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.