Gene detail

Detailed information of ENSFVQP00000021591.1 in Callogorgia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Callogorgia gracilis · all data for this species · gene families

Sequence

CDS

ENSFVQT00000024260

ATGTCATCACCATCTAAACTTGTCATGACCACCACTGGCCTGGTGTTCTCTGGTCGAGTACACAGCTCTAACCTAAGTGATTCGTCCAAAAAACTATCAGAATGGAGGGAGGTTTTGCCAGGCGGTGAGGTTCCGTTTGAGTTCAAACAAGCCCGAGAGAAACAGAGACATAAGGAAACCCATGAATTGAAAGTTCATCAATTGGTTGTTCAGATAGAAGGCTGGAAACAGGTCTCCCCAGTATCTGTAGACAAAGTTGGAGCATTTTTTAGACAAGTAATGCCAGCAGATGACATGAAGtCCAACCAAATGAACCCTGCCCGTGTTGTGTTCGAAATTAAACTAGAAAATGGTGCACAAAAGGTTGTCACTGTGAAATCTGCATTGGTTTTGAGTAACAAGACAGATATGATTTTGGAAATGAAGTTAGATATTCAAAATGGTGAAGCCACTTTACCTCCTCTGGCTCCTCAATCAAATTATGCTCTTCCTCTTCCTTACATTCAACACCCTCTCTTTATCCGTCCCAAGGGGAAGGAAACACAGTTCTCAACTTTGCCTTTGGAGTGGAAAAATGTCACTGGGTCTTTTGAAAACGTCGGAGGCTTTGGAGAATGTGCAGCTCTAAACGGCTCGGAGGTAGACAATTACAGGTGTCAGATGCGGATTGGTAAAGGACAACATCATGATGGTGGTAAACCTGTGTGgtGTGTGCCGTTTTCATTGGAATATCCCAGAGAATTTACGAGAATCCATTCAAGACAGTCAGATCGACGACCTGACATGGTCTATGATGTTGGTATTGATGTTCGTTTTGGGCAAGGTCGTTTTCGTGACACCAGAATAGTCACATTTGCTCCTCGCtatcaatttgaaaacagaaGTTCGCATACTCTGGCATTTCAACAAAGACATTTTGTTCGAGAACAGGAAACAAATAATCCTGAAGGTACATTGACTTCACCATCCGGTGCTCAAATAGTATGGCACTGGGAAAGAACAGACCTTGATCAGTTACTGTGTATTAGACTCAACGACGTTTCGGACTGTCGTTGGTCAGGGGGCTTCAGAATTGATCGAGATGATTCCTCCCACATTATCATGAGATGTTCCAGTAGTTTACTGTTGTTTATCCGTGCTGAAGTTATGCTAAAAGGAGCTGTGTTTCATATTGTTTTTACTGATGCTAATCAACTACCACCTCCATATCGCATTGACAATATGTCGGAGATGCCTGTTCTGTTCTATCAAAGCCGTACTGAAGATCATCAAAGATGTCTACTACAACCTAAACAATCTGTTCCATATGCTTGGGATGAGCCGACATTACCTCGTCAGCTGACACTGGGTATTGTAAATGATGGTTCATTTGTACATTTCTCTTTAAACCAACTTGGAGAGAAGGACAAGTTGTATTACTATAATGCCATTTATATCGCATTCACACACACGTTTACCAATTTTGATGGCAGTGTTTCTGGCTCGTTTCGTATTCATCCAGCTGATGCCTCATCTGATGATGTATTTTCTCAAGAACTAGTTCTAGATGTTCCTCAGGGCAGTGCAGTTATTCTCAGTAAAAAGGAACCTTACAAGCGGACACAGCTATGGCGAATGACGTCCTCAGGAATCTTATTCAATGAAGGATCATCCCCTTTGTTTGATCCTCGGAAACCATCGTCATCCCGAGCTGGTTTTGTACTTGATGTTGGCCACCATGACCCATCGGCAATGGTAAGAGGTCGAAAGCCATTGCAGTTGGTGGTCAGTAAACTAAGCTCACAAAGAAAGACGTTTCAAACTTGGGCGTTTTCAAAGGATGGAAGAATGAGAAACCgcataaaaaattattgtgTCCAGCCTAAGCTTGGTGGTGTTGGTCTTCATCAAggTGTGGATGCAGTCCTATGCTCTATTCAAAACCCTTCTGCTGAGAATGTTCCAATAGAACAATTGATCAATGTGCAGAAGTTACGTCCTGGTTCAGGAATGTTGTTAGTTAAAGTGCTTGCAGATGGACCAACTAGAACTGTTCGAATTGCCGATGTACAGCAAGAAAACGACCAAGAAGAACATTTTGGCAAAGACTGGATGGTTGTTGAAGGTCGTGGTCCCTTAAGACAGACCACACTTGCTGGTTACACACacgatcaaataaataaacggACAGAAATTAAAATGCGCTTGGCTGGAGGAATCGGTATCTCTTTAATAAACAACATCCCCGAAGAACTGGTTTTTGCAACCTTTAGTCCAATCGAGATGGATTATGTAACAACTGCTTCTCTCCAAACCCTGGATATTAGCATTGGAAATATTCAGgTCGATGATCAACTTCATTTAACTCAGTATCCTGTGATGTTATTTGTCACACCTTCCTCCAAAGAAGATAGCTCTTCAAATGAACCCGCTGTTCGTCTCTCGGTTGCCAAGGAACCAACAAAACTTAAAAACAGCGAAATATTTAAGCATCTTGAAGTATCTTTGCGAAAATTAACTTTACAAGTCGATGAAAGACTGTTGTTCAAACTTCTCCAGTTCTTCGGCTGGGTGTACAGTGACGACGATCTCCCCATAAACCAAGATTCAGATGACCTGGGCATTGAAACACAAAGATCACCTTCATCCGTTTCTCCATCAAGCCTCAAACGGTACTACTTTGAAAAGTTTCTGTTTAACCCAGTTCAAATTCGTGTCTCTGTTGCCACTGTCACAAGACTCCCAGAGGACTTAAAACAAATCAAGTCATCGTTAGGCTTGATATTAGTTCGTTTACAAGACGCTATTGTTGATCTAGAGTCATTTTCAAGAACTCATGGTTTTGATACAAGATCAGCTTTGCTTGATGCATTGTCCAAACACTATAATGAGGAACTTCGAGGTCAAGCGCCTTTTATTTTGGCTTCAGTTGATTTTCTTGGAAATCCCATGGGTCTGTTCAATGATGTGTCCAGTGGACTTGAAGGCCTGGTGAGACGAGGAAATGTTGGTGGATTGTTTCTGAATGTTGCCCATGGATTATCGGACACAGCTGCAAAGCTCACTGGCTCGTTATCTGATGGTCTTTGGTCTGCCTCATCTGATTCTAAATCTCTTGAAAGTCGAGAAGCAATGCGTGCAGAGAGACATCACCAAAGTAGTGGTGATCATTTAGTGGCTGGGATTAAAGGACTGGGTATGGGTCTTGTTGGTGGTCTGACAAGCATTGTGACACAGCCTATCGAAGGTGCAAGTGAGAAAGGAGTTCCAGGCTTTATTCAAGGTCTGGGCAAAGGCATTCTCGGAACATTTGCTAAACCAACTGCAGGTGTTTTAGACTTTGCCTCGGGTGTGTCAGCAGCAGTAAGAGGCTCAGCCACAAGCAGTTCTCGCCTGTATCAGCCGAAACGAGTTCGTACCATTAGAAACTGTTTTGGACCTGGAGGAGCTATTCCAAGATtctcaaaaacaaattctGAAGGACAACATATTGTTCTTAAATTAAATGGAAATAATATGGATGAAAAATTTATAACATCAGAATCTGTGCGCACCGACACAGATGGTCGTGTCAAAGTGCTACTTACCAATGAGAGGGTCTATTTTGTAAAAACGAGTGGAGTGCCATCACCAGAATCAATTTTGGTTTCTTTAAAGTTTGAAGATGTCCTTGACTgtcatcatttaaaaaatgAGTCTGTTGACTATGTGGAATTATCAAGAAATTTCTCGGAGCCGCCAGTACGAGTTCGCTGTGAAGCTGCATCAGCTCAAAAGCTGGTTCAAAAGATTAATTATGCTAAAAGTCTTTTTGAAGAAGTTAAACAAACTGTCATAGTGAAACCAAAAGAGACTGTCACCTAG

Transcript

ENSFVQT00000024260

CTCCAAGCAACACCATCTGATTCTGCTGCCACAGAGGGAAACGCTGGTCATTTTAAAAAGCGGGCACCATTTGTACCATTCCTTCTACGAAATGAAACAGGCTGCCCGTTACATTTTGCTACATTAATGTCATCACCATCTAAACTTGTCATGACCACCACTGGCCTGGTGTTCTCTGGTCGAGTACACAGCTCTAACCTAAGTGATTCGTCCAAAAAACTATCAGAATGGAGGGAGGTTTTGCCAGGCGGTGAGGTTCCGTTTGAGTTCAAACAAGCCCGAGAGAAACAGAGACATAAGGAAACCCATGAATTGAAAGTTCATCAATTGGTTGTTCAGATAGAAGGCTGGAAACAGGTCTCCCCAGTATCTGTAGACAAAGTTGGAGCATTTTTTAGACAAGTAATGCCAGCAGATGACATGAAGtCCAACCAAATGAACCCTGCCCGTGTTGTGTTCGAAATTAAACTAGAAAATGGTGCACAAAAGGTTGTCACTGTGAAATCTGCATTGGTTTTGAGTAACAAGACAGATATGATTTTGGAAATGAAGTTAGATATTCAAAATGGTGAAGCCACTTTACCTCCTCTGGCTCCTCAATCAAATTATGCTCTTCCTCTTCCTTACATTCAACACCCTCTCTTTATCCGTCCCAAGGGGAAGGAAACACAGTTCTCAACTTTGCCTTTGGAGTGGAAAAATGTCACTGGGTCTTTTGAAAACGTCGGAGGCTTTGGAGAATGTGCAGCTCTAAACGGCTCGGAGGTAGACAATTACAGGTGTCAGATGCGGATTGGTAAAGGACAACATCATGATGGTGGTAAACCTGTGTGgtGTGTGCCGTTTTCATTGGAATATCCCAGAGAATTTACGAGAATCCATTCAAGACAGTCAGATCGACGACCTGACATGGTCTATGATGTTGGTATTGATGTTCGTTTTGGGCAAGGTCGTTTTCGTGACACCAGAATAGTCACATTTGCTCCTCGCtatcaatttgaaaacagaaGTTCGCATACTCTGGCATTTCAACAAAGACATTTTGTTCGAGAACAGGAAACAAATAATCCTGAAGGTACATTGACTTCACCATCCGGTGCTCAAATAGTATGGCACTGGGAAAGAACAGACCTTGATCAGTTACTGTGTATTAGACTCAACGACGTTTCGGACTGTCGTTGGTCAGGGGGCTTCAGAATTGATCGAGATGATTCCTCCCACATTATCATGAGATGTTCCAGTAGTTTACTGTTGTTTATCCGTGCTGAAGTTATGCTAAAAGGAGCTGTGTTTCATATTGTTTTTACTGATGCTAATCAACTACCACCTCCATATCGCATTGACAATATGTCGGAGATGCCTGTTCTGTTCTATCAAAGCCGTACTGAAGATCATCAAAGATGTCTACTACAACCTAAACAATCTGTTCCATATGCTTGGGATGAGCCGACATTACCTCGTCAGCTGACACTGGGTATTGTAAATGATGGTTCATTTGTACATTTCTCTTTAAACCAACTTGGAGAGAAGGACAAGTTGTATTACTATAATGCCATTTATATCGCATTCACACACACGTTTACCAATTTTGATGGCAGTGTTTCTGGCTCGTTTCGTATTCATCCAGCTGATGCCTCATCTGATGATGTATTTTCTCAAGAACTAGTTCTAGATGTTCCTCAGGGCAGTGCAGTTATTCTCAGTAAAAAGGAACCTTACAAGCGGACACAGCTATGGCGAATGACGTCCTCAGGAATCTTATTCAATGAAGGATCATCCCCTTTGTTTGATCCTCGGAAACCATCGTCATCCCGAGCTGGTTTTGTACTTGATGTTGGCCACCATGACCCATCGGCAATGGTAAGAGGTCGAAAGCCATTGCAGTTGGTGGTCAGTAAACTAAGCTCACAAAGAAAGACGTTTCAAACTTGGGCGTTTTCAAAGGATGGAAGAATGAGAAACCgcataaaaaattattgtgTCCAGCCTAAGCTTGGTGGTGTTGGTCTTCATCAAggTGTGGATGCAGTCCTATGCTCTATTCAAAACCCTTCTGCTGAGAATGTTCCAATAGAACAATTGATCAATGTGCAGAAGTTACGTCCTGGTTCAGGAATGTTGTTAGTTAAAGTGCTTGCAGATGGACCAACTAGAACTGTTCGAATTGCCGATGTACAGCAAGAAAACGACCAAGAAGAACATTTTGGCAAAGACTGGATGGTTGTTGAAGGTCGTGGTCCCTTAAGACAGACCACACTTGCTGGTTACACACacgatcaaataaataaacggACAGAAATTAAAATGCGCTTGGCTGGAGGAATCGGTATCTCTTTAATAAACAACATCCCCGAAGAACTGGTTTTTGCAACCTTTAGTCCAATCGAGATGGATTATGTAACAACTGCTTCTCTCCAAACCCTGGATATTAGCATTGGAAATATTCAGgTCGATGATCAACTTCATTTAACTCAGTATCCTGTGATGTTATTTGTCACACCTTCCTCCAAAGAAGATAGCTCTTCAAATGAACCCGCTGTTCGTCTCTCGGTTGCCAAGGAACCAACAAAACTTAAAAACAGCGAAATATTTAAGCATCTTGAAGTATCTTTGCGAAAATTAACTTTACAAGTCGATGAAAGACTGTTGTTCAAACTTCTCCAGTTCTTCGGCTGGGTGTACAGTGACGACGATCTCCCCATAAACCAAGATTCAGATGACCTGGGCATTGAAACACAAAGATCACCTTCATCCGTTTCTCCATCAAGCCTCAAACGGTACTACTTTGAAAAGTTTCTGTTTAACCCAGTTCAAATTCGTGTCTCTGTTGCCACTGTCACAAGACTCCCAGAGGACTTAAAACAAATCAAGTCATCGTTAGGCTTGATATTAGTTCGTTTACAAGACGCTATTGTTGATCTAGAGTCATTTTCAAGAACTCATGGTTTTGATACAAGATCAGCTTTGCTTGATGCATTGTCCAAACACTATAATGAGGAACTTCGAGGTCAAGCGCCTTTTATTTTGGCTTCAGTTGATTTTCTTGGAAATCCCATGGGTCTGTTCAATGATGTGTCCAGTGGACTTGAAGGCCTGGTGAGACGAGGAAATGTTGGTGGATTGTTTCTGAATGTTGCCCATGGATTATCGGACACAGCTGCAAAGCTCACTGGCTCGTTATCTGATGGTCTTTGGTCTGCCTCATCTGATTCTAAATCTCTTGAAAGTCGAGAAGCAATGCGTGCAGAGAGACATCACCAAAGTAGTGGTGATCATTTAGTGGCTGGGATTAAAGGACTGGGTATGGGTCTTGTTGGTGGTCTGACAAGCATTGTGACACAGCCTATCGAAGGTGCAAGTGAGAAAGGAGTTCCAGGCTTTATTCAAGGTCTGGGCAAAGGCATTCTCGGAACATTTGCTAAACCAACTGCAGGTGTTTTAGACTTTGCCTCGGGTGTGTCAGCAGCAGTAAGAGGCTCAGCCACAAGCAGTTCTCGCCTGTATCAGCCGAAACGAGTTCGTACCATTAGAAACTGTTTTGGACCTGGAGGAGCTATTCCAAGATtctcaaaaacaaattctGAAGGACAACATATTGTTCTTAAATTAAATGGAAATAATATGGATGAAAAATTTATAACATCAGAATCTGTGCGCACCGACACAGATGGTCGTGTCAAAGTGCTACTTACCAATGAGAGGGTCTATTTTGTAAAAACGAGTGGAGTGCCATCACCAGAATCAATTTTGGTTTCTTTAAAGTTTGAAGATGTCCTTGACTgtcatcatttaaaaaatgAGTCTGTTGACTATGTGGAATTATCAAGAAATTTCTCGGAGCCGCCAGTACGAGTTCGCTGTGAAGCTGCATCAGCTCAAAAGCTGGTTCAAAAGATTAATTATGCTAAAAGTCTTTTTGAAGAAGTTAAACAAACTGTCATAGTGAAACCAAAAGAGACTGTCACCTAGAAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06650 all species →	VPS13_VAB	Vacuolar-sorting associated protein 13, adaptor binding domain	Domain	Interproscan
PF16909 all species →	VPS13_DH-like	Vacuolar-sorting-associated 13 protein, DH-like domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026847 all species →	Family	Vacuolar protein sorting-associated protein 13	Interproscan
IPR000772 all species →	Domain	Ricin B, lectin domain	Interproscan
IPR009543 all species →	Domain	Vacuolar protein sorting-associated protein 13, VPS13 adaptor binding domain	Interproscan
IPR035992 all species →	Homologous_superfamily	Ricin B-like lectins	Interproscan
IPR031645 all species →	Domain	Vacuolar protein sorting-associated protein 13, DH-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16166 all species →	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006623 all species →	Biological Process	protein targeting to vacuole	Interproscan
GO:0007005 all species →	Biological Process	mitochondrion organization	Interproscan
GO:0019898 all species →	Cellular Component	extrinsic component of membrane	Interproscan
GO:0045053 all species →	Biological Process	protein retention in Golgi apparatus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSFVQP00000021591.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.