Gene detail

Detailed information of ENSFVQP00000021815.1 in Callogorgia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Callogorgia gracilis · all data for this species · gene families

Sequence

CDS

ENSFVQT00000024492

ATGTACAAGATGGATGAAAATGGCGCGATTGATGCGATGGTCAATAGATCTAGCCCCCAAGAAGAGACACTACTTGTGCAAGCTTTGTATCCGTATTCCTATGAAATTACGAGTGGACAGCAAGTCTCATTTGAGGCAAATGACATTTTTATACTTGTAGAAAAGTCTAATAACGATTGGTGGCATGTTTATAAAGATGGCCAAAATTTTTACGTTCCAGCGAATTACGTGTGCGAAGCGACGGATGTTGTTGATGAAGAAATTTTATCTACGGGGAGTTTGAATAGCCAAGGAGAAACAAATACGTTGTCTCCTTCTTCTGAGAGTTCACTTCCAGATTTAGAGGAAGACACGAACAAGGAAGCGATTGAGAAGTGCACTTTGTTTGGAGGAAGTGATTCTGAGAGGATCTATGCAAACATACCAATAAACGTTGAACATGAGtcTCATAGACGTCATCATTCAGCTGGAAATCGTTCACCCTTTACCCGCCCCAAATCAGCCACCTTACCTGCAGGATGGGTGGTTGAAACTGACCATAATTCAGGACGTCCACAATATGTTAATACCAAAACTAAGGAAATCATGTTGAAACCTCCACGTACTAAATCGGTAACtaaagatgaagatgataattttgaaagaaattcaCTCAGCTTACCAAAAGGGTGGACGTTACAAAGACAAGAGTCTGTTTCAGAGGaatttttatatgtaaatGAACGCAACAATCAAATGtggcAATCTTCTATAGATGAGACTGGGAGGAAATACTACTATAACATCAATGGTGGGAACTCCTGCTGGGAGCTACCTTTATTTGATGATATTAATGTACTAAAAGTGCCTGAAAATGATGAAAAGGACCCTAAGGGTAGATTAACAACAAGACCTAGAATGTCGTCAGAAGGCTCAGAGCCTAGTGTTGTTAATTTGCGTCATAAATCATCACAATTGCATCTTCGAAATTCAAAATCAGCATCCATGATTGCTAACGTGGGTGCAGAAATGACCAGCTTTTCAaagGGCCATCAGCGGACATGTTCTGATCAGATGAGAGGTTCACTCATCATGACAGATGATTTTGGTCCACCTCCTTCCTTGCCCCAATTAAATTATACAATTAAAAAAGAAGGAACTGTCAACCGGAAAAAACTTTGTGAAAAGAGTGGGAAAAAAATCAAgaAAACATCATGGAGTCCATGTTATATGAAATTATCTTCATCAAACATCATTATatacaaaaaccaaaatacCGCGACACCTaAGCCAGGTTTTGCTCATGGTCGACCTGAAAGCAGTTGTGATCTTCGCGGTGCTGTAATTGAAAAAATGCCTGATGAAAATAAGAAAAGGAATATATTTCAGGTTGCGACTGTTTCCAAGTTATGTTTTCTTATTCAAGTGGAAGATGTGAGCGAGTTTAGAGATTGGTACCACATGATTTATGGTGTGATGAAATACCTGAGTGAAAGTGAGCCCTTAGATCACGGTATTCATGCCAGACTTTACGGGGAGATTTCACCCAAGCTACAGACACAAACCTCGATGTCTGCCTTCTCTTCAAGAGCATCTCTGAAGAAAAttCGTGATGGGGACAAAAAGAACATCAGGGATAAATTGAAAAAGCTTATGTCAAGAAGACCCACATTGGACGAATTACACAAGAAAGGAATCATGAAAGACATTACGTTTGGCTGCCATATTGCGAAGCTTTGTGCAAGAGAACAGACAACGGTACCGAGTGTTGTGACTCGTTGCATTGAAGCCATTGAAGCCAAAGGTCTTGATCTTGATGGTTTGTATAGAATATCTGGCAACGTTTCTGCAATACAACAACTCAGAATCACTGTAGACCAAGAAGAAGATTTGAAGTTTGGTGAACGCCCATTTGATGACGTCCACGTTCTGACGGGAACACTAAAACTATATTTCCGAGAGCTCCCAGAGCCATTATTTCCTTTCGACTCCTATACTGCTATTGTCGATAGCCTTAaaaaaagttcaaaagaagaaaagactTTGAGTCTTCGTACAGAGATTAACAATCTTCCATCACCAAACCTTGAGACAGTGATATACCTTTTCAAGCATCTCCGAAGAATAATGGAGAACAGCGAGAAGAACAGAATGCATGCACACAATATCGCCATCGTGTTTGGCCCAACATTGTTGGCTCCACGCGAGGAGCAGGGGAACATTGCTGTGAATATGGTTTATCAAAACCAAGTCATAgaatatattttgttagaatATGACAACGTTCTGGGATAA

Transcript

ENSFVQT00000024492

CACTATCATCACTTGCGGTCAAACCACGGTCAAACCAACTGTTCGACCAGAAGGAGTTACAACGCTTAAATACTAATAGAGTTTTATCTTTGATTTGAAATGTAATAAATTTGTATCTTGGAGGATATTTGACCGCATTTTGGCAAACAACGGATAATCTTCATCATGTACAAGATGGATGAAAATGGCGCGATTGATGCGATGGTCAATAGATCTAGCCCCCAAGAAGAGACACTACTTGTGCAAGCTTTGTATCCGTATTCCTATGAAATTACGAGTGGACAGCAAGTCTCATTTGAGGCAAATGACATTTTTATACTTGTAGAAAAGTCTAATAACGATTGGTGGCATGTTTATAAAGATGGCCAAAATTTTTACGTTCCAGCGAATTACGTGTGCGAAGCGACGGATGTTGTTGATGAAGAAATTTTATCTACGGGGAGTTTGAATAGCCAAGGAGAAACAAATACGTTGTCTCCTTCTTCTGAGAGTTCACTTCCAGATTTAGAGGAAGACACGAACAAGGAAGCGATTGAGAAGTGCACTTTGTTTGGAGGAAGTGATTCTGAGAGGATCTATGCAAACATACCAATAAACGTTGAACATGAGtcTCATAGACGTCATCATTCAGCTGGAAATCGTTCACCCTTTACCCGCCCCAAATCAGCCACCTTACCTGCAGGATGGGTGGTTGAAACTGACCATAATTCAGGACGTCCACAATATGTTAATACCAAAACTAAGGAAATCATGTTGAAACCTCCACGTACTAAATCGGTAACtaaagatgaagatgataattttgaaagaaattcaCTCAGCTTACCAAAAGGGTGGACGTTACAAAGACAAGAGTCTGTTTCAGAGGaatttttatatgtaaatGAACGCAACAATCAAATGtggcAATCTTCTATAGATGAGACTGGGAGGAAATACTACTATAACATCAATGGTGGGAACTCCTGCTGGGAGCTACCTTTATTTGATGATATTAATGTACTAAAAGTGCCTGAAAATGATGAAAAGGACCCTAAGGGTAGATTAACAACAAGACCTAGAATGTCGTCAGAAGGCTCAGAGCCTAGTGTTGTTAATTTGCGTCATAAATCATCACAATTGCATCTTCGAAATTCAAAATCAGCATCCATGATTGCTAACGTGGGTGCAGAAATGACCAGCTTTTCAaagGGCCATCAGCGGACATGTTCTGATCAGATGAGAGGTTCACTCATCATGACAGATGATTTTGGTCCACCTCCTTCCTTGCCCCAATTAAATTATACAATTAAAAAAGAAGGAACTGTCAACCGGAAAAAACTTTGTGAAAAGAGTGGGAAAAAAATCAAgaAAACATCATGGAGTCCATGTTATATGAAATTATCTTCATCAAACATCATTATatacaaaaaccaaaatacCGCGACACCTaAGCCAGGTTTTGCTCATGGTCGACCTGAAAGCAGTTGTGATCTTCGCGGTGCTGTAATTGAAAAAATGCCTGATGAAAATAAGAAAAGGAATATATTTCAGGTTGCGACTGTTTCCAAGTTATGTTTTCTTATTCAAGTGGAAGATGTGAGCGAGTTTAGAGATTGGTACCACATGATTTATGGTGTGATGAAATACCTGAGTGAAAGTGAGCCCTTAGATCACGGTATTCATGCCAGACTTTACGGGGAGATTTCACCCAAGCTACAGACACAAACCTCGATGTCTGCCTTCTCTTCAAGAGCATCTCTGAAGAAAAttCGTGATGGGGACAAAAAGAACATCAGGGATAAATTGAAAAAGCTTATGTCAAGAAGACCCACATTGGACGAATTACACAAGAAAGGAATCATGAAAGACATTACGTTTGGCTGCCATATTGCGAAGCTTTGTGCAAGAGAACAGACAACGGTACCGAGTGTTGTGACTCGTTGCATTGAAGCCATTGAAGCCAAAGGTCTTGATCTTGATGGTTTGTATAGAATATCTGGCAACGTTTCTGCAATACAACAACTCAGAATCACTGTAGACCAAGAAGAAGATTTGAAGTTTGGTGAACGCCCATTTGATGACGTCCACGTTCTGACGGGAACACTAAAACTATATTTCCGAGAGCTCCCAGAGCCATTATTTCCTTTCGACTCCTATACTGCTATTGTCGATAGCCTTAaaaaaagttcaaaagaagaaaagactTTGAGTCTTCGTACAGAGATTAACAATCTTCCATCACCAAACCTTGAGACAGTGATATACCTTTTCAAGCATCTCCGAAGAATAATGGAGAACAGCGAGAAGAACAGAATGCATGCACACAATATCGCCATCGTGTTTGGCCCAACATTGTTGGCTCCACGCGAGGAGCAGGGGAACATTGCTGTGAATATGGTTTATCAAAACCAAGTCATAgaatatattttgttagaatATGACAACGTTCTGGGATAATAGAACACGAAGTTATAAATAGTAGAAGTTAAATGAAATTTAGGACAATAATAAAGCATTACCACCATACAATATGATTGATAGGTTGAACGTATAATGACTGTATCACATATGACATACATttgtaagttgtttttttacccaCTTCTTAGATGTGTCAGACAGTAGGTATAGGATGATAATGAATATTGTAATTTTCCGCATGCGGATAAATAGATGATGTTGATTCTGTCAAATTGACAGTGCAAAAATGTAAAGATAAACAAAACGACTTAATTTAGTCTCATATTGTTCGTCGTTAATGTAATTTGGTACATATTAGAATTAGTAAAGTATTAAGAATTGACGACCATGCATTGACCATCATTAACCGAAAATATTTGGTGCGACTTTTTAAACTTTCCTatcaatatttataaatttctcCATACACATGACTGTACCACATAAGTGTAGTTTTTAAgaataattttgtatttttactagtttaagaaaaattataaatatcatTGTGAAACCTCCTTA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15410 all species →	PH_9	Pleckstrin homology domain	Domain	Interproscan
PF00620 all species →	RhoGAP	RhoGAP domain	Domain	Interproscan
PF00018 all species →	SH3_1	SH3 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR008936 all species →	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR001202 all species →	Domain	WW domain	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR036020 all species →	Homologous_superfamily	WW domain superfamily	Interproscan
IPR000198 all species →	Domain	Rho GTPase-activating protein domain	Interproscan
IPR041681 all species →	Domain	Pleckstrin homology domain 9	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR050729 all species →	Family	Rho GTPase-activating protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23176 all species →	RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0043087 all species →	Biological Process	regulation of GTPase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20636	ARHGAP12_27; Rho GTPase-activating protein 12/27	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.