Gene detail

Detailed information of ENSFVQP00000024466.1 in Callogorgia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation CGRAC1 · all data for this species · gene families

Sequence

CDS

ENSFVQT00000027468

ATGCTGGAACCTTCTGTGGACGGAGCGGGCAGTGCGATAAATGGTATTGAGGATGTCAGAGCGGGATTGCAGGGAAGTGTCCGGCTATTTATCTTCCATTCATCTCTTGTTTTTCTGACGCCAAGTCTTACAAAATCATTAAGTAACCAGGTTGACATTTGCAAAAGAGTCATACAAATCTACAGAAATATTGTCTTGGAAACACCAATGCATGGAAAGACATGGGAACAGTTACTTGTTGTACTTCTTGCAATTGCTGAACATGTGTTAAAAGATAAAGCCGTTGAGCCGAAATTATCTTCGTTTGCAGGAAAACTTGCTCCCGTGTTGCTACAGACATTATTTGTCACCTGGATACGTGCTAACTTAAGTGTTACAGTGAGTGTTGAATTATGGGACCGGTTTCTCGATGTTGCTTCGTCTCTCACCCATTGGAATGAAGTTGTTTTTCAGTGGAAGCAAACAATGGACACATTGACTAGTGTCATAGCTCGGAGAGTGTATGGACTGAACTTGAACGACTTGCCACTTGACAGACTGAGTGAACAAAAACACAAGAAAAGAAGACACCAGTTTCAAGCTAAGGATAACTCAATAGATAATACCAAGTCCAAAATACTTCCAACTTCCTCAGTTCAAGAATCCAAACAAGAAGTTGCGCCTTCAGCTGCTGCTCCTATAGTTGTGCCGCCACAGGAAAAAGACgttgaagaaatgaaaaatgaagGAAGTGCGCCGGCAACTGGTGAAAGTCAGGAGTGTAAAAGTAGTTCAGACTTGCCAAAAGAACCTATCCAATATGACCAAACATCGACGACCATGGAAGGGGACAGAAACTCACAGATCACAATAGAGCAGGAATCCGAGAGGGGTTACGAGTCGGATGTTACAGACACGGGTAGCGATCTAAGTTTTGAAACTGCGCCGAAGTCGATGCAAGGTGATACAGATATGAGTCTTAACAGCTTGCTAAGCACGTATGGTGGCAGTGCGCCCAAGGATTTGGATGGAGATAAAAACTCAACTACGACAGCTAATGAAGATACAGAAAGTATTGATGATAGCTCCAGCAGAAGTACCATTGAAAACGGCAAGAACCAAAATACCGACTTTACTGAAGTGGACGGAAAGCGAAAGCGAGCTAGAAAAGGCGTAAAGCCGTTTTGGAAAGATAGCGATGGAGCTGAAGAAATTTCGTCAGACAGTGAAGTGCCATCTTCTTTCAGTAACCCAATTCATGaTGAAACCGCCTTCGAGAGTGTAATACCAATCACAACACCTTTGGACGCTCAGACTGTTTCCCTCGAAATTGGTGAGCCTTCTGTGCACAGTTTGGAAATAGAAACTGAAGTGAGCGTTGTGTGCGGAGGCACAAAAGAAGGTTGGAGCCCAGTTGCTGCAGTTGTCCTTTGGTGTCGAATGCTTGGTGTTTTGGGCAATATCAACGACATAGAGAGTGCTGCAATTCACGCCCAAGTCTTGGAGTCGCTGTCTCAAATCTGGTGTTTATTGGAAAAGATTAGATTAAATCAAGGTATCTCAGAAGATAATAAATCCACGCCATCCGTTCCACAGTTGCTCCCTCCattgcattatttttcctCTTGGCTTTTCCAGGCAACCAATCTTCCTCAGAAATACAAGCACGGCCGTCTCATTGCCTATCAGCTTTTGTGTTCCATGACGGTGAGACGACAGGATAATCCGTTGTCTGAGGATTATTTGAGGCATTTTTACCGATGTTTGCATGATGGACTGACCGGCACAGATCAGGATATTATAAACGCCATCATGAGCAAATGCGACAAATTCTTCGCTATGGTTCTTCCTAGTTCGTCTCTATTAATTCCGGATTTTATTTATGCTGCAAACACTATAATCGAGAGTACCAACACTGAGtatccgagaacggaggctgtTACAGTTCTTGCTTCATTGTTATGTTATCCCATTGCGTTTCCTAACATGAACATTTATCAAATCGGGTCTTCCCCTCTTGGTGAACAAGTGACTGCGTGTCGGGATTTAAAGGACAAAATCAGTGAAGCTCTTTATAAAGTAGCCAGAACTGACCCCGACTGTCATGCAAGATGTACAGCGCTGAGTGCAATTGGAATTTTTATAGTGGAGGATTTGACTCACCAAGGGGGAGACTGCGGCCGTTTGCTTCAGTATACCTCATTATTGCTCACGTCAATTATGTTTAAAAACTGGTCTGTATCAAACGTCGCGATTGGTATTATTCGTAACTTATCCGAGTACTACGAGCAACTCTCTAATTGTGACGCGGATTTACCTTTGAGAATTCTCCAGGTTTTATGTGAAATAATTATGCGCTGTGTTAGTGAAGGCGCGTTAACGGATACTTCTCATGGAGTTAAGGTTCTTAATCCATTGTTGTCGTGTCTTCTTGATTGGGTTATGGTTATTCCGTTGAGTGCATTAATGAGAGTCCGTCATGAAAATCAAAGTACACTTTCTCAAGTATTCCAGtcgttaaaatttgttgtgtCGAACAAATCAACAACAGCTGCGCGAGAGTTCAATATTACTAGAATGATATCACATGAAGACTTACCAATACATCTAGGACAAATCCACCAGGATTTTGTTGACTCTACCCCTACTAGTCCTGCAGACATTACGGACAGTGAATACGGAGACAACATACTCTCTGAGACAATGAACAGAGTAAAGAAGACTGCAAAAGCGGTGATTTTGCACATTGTGAATCATTTGAATCACTTTCCTTTGTCTTCTGGAGCTGCACGTCTAACAAGTATTGTGACTGAAAACCAAGACAACGTGTACTGCAGCGAACAACAAGAATTGACTCCAGCGATATTTTCGTCTCCCAATGTCCAAtTTTTTATACTCAATGATACTTCGCTTATTTCTCTCGTTGAGTTGCCACTAAAGcaGAATGATTCCACTAATCACCAGACCATCCTCTGTGGTAGCACAGCAACACGCCTCATTGTTAGAGACATGTgtggtaaacattgtttagATATCTCCACCTTATTTGGACCTAGTGTAAACaatggaaatattttttctggTGTTTTAAAGTGTCTTTTTGACGACGAAGAATTACGAGAAATATTTAAACCAAGACACGACAGCTCTTTTTGTCGAAAGTCAGCAGAAACATCGCATCAATCTGATAAATTAGATGAGCTTCTTAAAGATATTGGTTCAACAAGTCCAGAATGCCTGTTTTATCCACATCTGTCTCTTAATGAACCCGCACCAACTCCGCTTCCGTTAAACGAACAATTTGAAAATAAGCTAATGAAAGCTATTGAAATgcaaagagaaagagaagaagaatatTGCCAGAATACTCTACAAGACCAAAGatTGAAAGGATCTCCTATTAAtccaaatgtttttcaaaagcCAAATAACCCATTTCATTTATCGCACTTTCTTTTTAATCAACTTGGAATGTTTGGCTGGGAAAAAAGACCGAAAATAGATCTGCTTAAAAAAAGTGACAAACTTGTTCGAGAACTGAAACATCTTGACAACAGAAAAAgTCGGGAAACACACAAGATCGCTGTATTTTATGTGGCTCCAGGACAGGAAGACAAAACGTCGATAATGAGTAACACTTCAGGAAGTAAAGAATACGAAAATTTTGTAGCTGGATTAGCTTGGGAGGTTGAGCTGTCTACCCATAGTGGTTTCATGGGTGGCTTGGATAAAAACCAGTCCACAGGGAATACAGCTGCTTACTTTGCCAATTCTACAGTTGAAATCATGTTCCATGTGGCAACAAGAATGCCTGTATCAACTGATGAAGGTGGATTTATTAAAAAGGTACGCCATCTTGGGAATGACGAAATCTGGATAGTTTGGTCGGAGCACTCACGAGATTTTCGTCATGGTATCGTAAATGCCGAATTTGGTGACGTTGTTATTGCGGTATATCCTTTGAAAAACCATCTTTTTAGAGTCCAGATTTTAAAGAAAGGAGAGATACCATATTTTGGACCTCTTTTCGACGGAGCTGTTGTAGATCGTCGAGTTCTTCCGCCGTTGGTTCGCATGACGGCAGTTAACGCTAGTCGAGCGAAACGATCTCTAATTCCAGGAATGCAGACATACTACGAAGAGAGAGCCAGTTGCATTAGTAACATCGTAAATCAGCATAAAGAAACCACAGTATTCGAGGATTTCGCAGAGGAAGTATTTTGTCCGTTGCCCAGGAAACCTGAAGAAAACACGCAACCATTCTCTTTATCTTCGCATTTCAGACAGGCTTCTGTCGGAGACGAGCCCTCGGTGACGAAACGTGACGGGTATAGCACTTTACCATCAACGCGAATAGCGAGATCCGTAGCAGCCTGTcgctga

Transcript

ENSFVQT00000027468

aGTGACAACAGACCCAAATTTATGCTGGAACCTTCTGTGGACGGAGCGGGCAGTGCGATAAATGGTATTGAGGATGTCAGAGCGGGATTGCAGGGAAGTGTCCGGCTATTTATCTTCCATTCATCTCTTGTTTTTCTGACGCCAAGTCTTACAAAATCATTAAGTAACCAGGTTGACATTTGCAAAAGAGTCATACAAATCTACAGAAATATTGTCTTGGAAACACCAATGCATGGAAAGACATGGGAACAGTTACTTGTTGTACTTCTTGCAATTGCTGAACATGTGTTAAAAGATAAAGCCGTTGAGCCGAAATTATCTTCGTTTGCAGGAAAACTTGCTCCCGTGTTGCTACAGACATTATTTGTCACCTGGATACGTGCTAACTTAAGTGTTACAGTGAGTGTTGAATTATGGGACCGGTTTCTCGATGTTGCTTCGTCTCTCACCCATTGGAATGAAGTTGTTTTTCAGTGGAAGCAAACAATGGACACATTGACTAGTGTCATAGCTCGGAGAGTGTATGGACTGAACTTGAACGACTTGCCACTTGACAGACTGAGTGAACAAAAACACAAGAAAAGAAGACACCAGTTTCAAGCTAAGGATAACTCAATAGATAATACCAAGTCCAAAATACTTCCAACTTCCTCAGTTCAAGAATCCAAACAAGAAGTTGCGCCTTCAGCTGCTGCTCCTATAGTTGTGCCGCCACAGGAAAAAGACgttgaagaaatgaaaaatgaagGAAGTGCGCCGGCAACTGGTGAAAGTCAGGAGTGTAAAAGTAGTTCAGACTTGCCAAAAGAACCTATCCAATATGACCAAACATCGACGACCATGGAAGGGGACAGAAACTCACAGATCACAATAGAGCAGGAATCCGAGAGGGGTTACGAGTCGGATGTTACAGACACGGGTAGCGATCTAAGTTTTGAAACTGCGCCGAAGTCGATGCAAGGTGATACAGATATGAGTCTTAACAGCTTGCTAAGCACGTATGGTGGCAGTGCGCCCAAGGATTTGGATGGAGATAAAAACTCAACTACGACAGCTAATGAAGATACAGAAAGTATTGATGATAGCTCCAGCAGAAGTACCATTGAAAACGGCAAGAACCAAAATACCGACTTTACTGAAGTGGACGGAAAGCGAAAGCGAGCTAGAAAAGGCGTAAAGCCGTTTTGGAAAGATAGCGATGGAGCTGAAGAAATTTCGTCAGACAGTGAAGTGCCATCTTCTTTCAGTAACCCAATTCATGaTGAAACCGCCTTCGAGAGTGTAATACCAATCACAACACCTTTGGACGCTCAGACTGTTTCCCTCGAAATTGGTGAGCCTTCTGTGCACAGTTTGGAAATAGAAACTGAAGTGAGCGTTGTGTGCGGAGGCACAAAAGAAGGTTGGAGCCCAGTTGCTGCAGTTGTCCTTTGGTGTCGAATGCTTGGTGTTTTGGGCAATATCAACGACATAGAGAGTGCTGCAATTCACGCCCAAGTCTTGGAGTCGCTGTCTCAAATCTGGTGTTTATTGGAAAAGATTAGATTAAATCAAGGTATCTCAGAAGATAATAAATCCACGCCATCCGTTCCACAGTTGCTCCCTCCattgcattatttttcctCTTGGCTTTTCCAGGCAACCAATCTTCCTCAGAAATACAAGCACGGCCGTCTCATTGCCTATCAGCTTTTGTGTTCCATGACGGTGAGACGACAGGATAATCCGTTGTCTGAGGATTATTTGAGGCATTTTTACCGATGTTTGCATGATGGACTGACCGGCACAGATCAGGATATTATAAACGCCATCATGAGCAAATGCGACAAATTCTTCGCTATGGTTCTTCCTAGTTCGTCTCTATTAATTCCGGATTTTATTTATGCTGCAAACACTATAATCGAGAGTACCAACACTGAGtatccgagaacggaggctgtTACAGTTCTTGCTTCATTGTTATGTTATCCCATTGCGTTTCCTAACATGAACATTTATCAAATCGGGTCTTCCCCTCTTGGTGAACAAGTGACTGCGTGTCGGGATTTAAAGGACAAAATCAGTGAAGCTCTTTATAAAGTAGCCAGAACTGACCCCGACTGTCATGCAAGATGTACAGCGCTGAGTGCAATTGGAATTTTTATAGTGGAGGATTTGACTCACCAAGGGGGAGACTGCGGCCGTTTGCTTCAGTATACCTCATTATTGCTCACGTCAATTATGTTTAAAAACTGGTCTGTATCAAACGTCGCGATTGGTATTATTCGTAACTTATCCGAGTACTACGAGCAACTCTCTAATTGTGACGCGGATTTACCTTTGAGAATTCTCCAGGTTTTATGTGAAATAATTATGCGCTGTGTTAGTGAAGGCGCGTTAACGGATACTTCTCATGGAGTTAAGGTTCTTAATCCATTGTTGTCGTGTCTTCTTGATTGGGTTATGGTTATTCCGTTGAGTGCATTAATGAGAGTCCGTCATGAAAATCAAAGTACACTTTCTCAAGTATTCCAGtcgttaaaatttgttgtgtCGAACAAATCAACAACAGCTGCGCGAGAGTTCAATATTACTAGAATGATATCACATGAAGACTTACCAATACATCTAGGACAAATCCACCAGGATTTTGTTGACTCTACCCCTACTAGTCCTGCAGACATTACGGACAGTGAATACGGAGACAACATACTCTCTGAGACAATGAACAGAGTAAAGAAGACTGCAAAAGCGGTGATTTTGCACATTGTGAATCATTTGAATCACTTTCCTTTGTCTTCTGGAGCTGCACGTCTAACAAGTATTGTGACTGAAAACCAAGACAACGTGTACTGCAGCGAACAACAAGAATTGACTCCAGCGATATTTTCGTCTCCCAATGTCCAAtTTTTTATACTCAATGATACTTCGCTTATTTCTCTCGTTGAGTTGCCACTAAAGcaGAATGATTCCACTAATCACCAGACCATCCTCTGTGGTAGCACAGCAACACGCCTCATTGTTAGAGACATGTgtggtaaacattgtttagATATCTCCACCTTATTTGGACCTAGTGTAAACaatggaaatattttttctggTGTTTTAAAGTGTCTTTTTGACGACGAAGAATTACGAGAAATATTTAAACCAAGACACGACAGCTCTTTTTGTCGAAAGTCAGCAGAAACATCGCATCAATCTGATAAATTAGATGAGCTTCTTAAAGATATTGGTTCAACAAGTCCAGAATGCCTGTTTTATCCACATCTGTCTCTTAATGAACCCGCACCAACTCCGCTTCCGTTAAACGAACAATTTGAAAATAAGCTAATGAAAGCTATTGAAATgcaaagagaaagagaagaagaatatTGCCAGAATACTCTACAAGACCAAAGatTGAAAGGATCTCCTATTAAtccaaatgtttttcaaaagcCAAATAACCCATTTCATTTATCGCACTTTCTTTTTAATCAACTTGGAATGTTTGGCTGGGAAAAAAGACCGAAAATAGATCTGCTTAAAAAAAGTGACAAACTTGTTCGAGAACTGAAACATCTTGACAACAGAAAAAgTCGGGAAACACACAAGATCGCTGTATTTTATGTGGCTCCAGGACAGGAAGACAAAACGTCGATAATGAGTAACACTTCAGGAAGTAAAGAATACGAAAATTTTGTAGCTGGATTAGCTTGGGAGGTTGAGCTGTCTACCCATAGTGGTTTCATGGGTGGCTTGGATAAAAACCAGTCCACAGGGAATACAGCTGCTTACTTTGCCAATTCTACAGTTGAAATCATGTTCCATGTGGCAACAAGAATGCCTGTATCAACTGATGAAGGTGGATTTATTAAAAAGGTACGCCATCTTGGGAATGACGAAATCTGGATAGTTTGGTCGGAGCACTCACGAGATTTTCGTCATGGTATCGTAAATGCCGAATTTGGTGACGTTGTTATTGCGGTATATCCTTTGAAAAACCATCTTTTTAGAGTCCAGATTTTAAAGAAAGGAGAGATACCATATTTTGGACCTCTTTTCGACGGAGCTGTTGTAGATCGTCGAGTTCTTCCGCCGTTGGTTCGCATGACGGCAGTTAACGCTAGTCGAGCGAAACGATCTCTAATTCCAGGAATGCAGACATACTACGAAGAGAGAGCCAGTTGCATTAGTAACATCGTAAATCAGCATAAAGAAACCACAGTATTCGAGGATTTCGCAGAGGAAGTATTTTGTCCGTTGCCCAGGAAACCTGAAGAAAACACGCAACCATTCTCTTTATCTTCGCATTTCAGACAGGCTTCTGTCGGAGACGAGCCCTCGGTGACGAAACGTGACGGGTATAGCACTTTACCATCAACGCGAATAGCGAGATCCGTAGCAGCCTGTcgctgaattacgaaggactAGGTGTTGAGGATTAGATAGGGAGGAAAACCGAGCACCC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20412 all species →	RALGAPB_N	RALGAPB N-terminal domain	Domain	Interproscan
PF02145 all species →	Rap_GAP	Rap/ran-GAP	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR046859 all species →	Domain	Ral GTPase-activating protein subunit alpha/beta, N-terminal domain	Interproscan
IPR035974 all species →	Homologous_superfamily	Rap/Ran-GAP superfamily	Interproscan
IPR027107 all species →	Family	Tuberin/Ral GTPase-activating protein subunit alpha	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR000331 all species →	Domain	Rap/Ran-GAP domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10063 all species →	TUBERIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0051056 all species →	Biological Process	regulation of small GTPase mediated signal transduction	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0043547 all species →	Biological Process	positive regulation of GTPase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K25768	RALGAPA; Ral GTPase-activating protein subunit alpha	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.