Gene detail

Detailed information of ENSFVQP00000028732.1 in Callogorgia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Callogorgia gracilis · all data for this species · gene families

Sequence

CDS

ENSFVQT00000032104

ATGGCGTACAACGACGAGGGCGATCGGGAAATAGGAGAAACGTCTTCTGGGGGAATTTTTGCCGGAAAATTTAAACGACATGCCGATCTTAATGAGCTGTTGGATAGTGGCAAGGATAACCATAAATTGGAAGCTATGAGACGTATTATTGAGAGTATATCAAGTGGTAAAGATGTTTCCCAATTGTTTGCTTCTGTTGTGAAGAATGTTGTCTCCAAAAATACAGAGATCAAAAAGTTAGTTTATGTTTACTTGGTACGTTATGCAGAAGAACAACAAGACTTGGCATTACTTTCTATCAGTACATTTCAAAAAGCTTTGAAGGATCCAAACCAGCTAATTAGAGCAAGTGCATTAAGAGTGTTATCCAGTATAAGAGTTCCAATAATTATACCAATTATGATGCTGGCTATTAAAGAGGCTGTAACAGACATGTCTCCATTCGTGAGGAAAACTGCATGCCATGCCATACCAAAACTTTACAGTTTGGACCCTGAGCTAAAGGAACCATTGATAGAAGTTATCGAAAAACTTTTAAAGGATAAAACTACACTTGTTGCTGGCAGTGCAGTGATGGCATTTGAAGAACTTTGTCCAGACAGGGTTGATCTAATTCAtaaaaattatcgaaaactGTGTAATTTATTGGTGGATATTGATGAATGGGGACAGTCAGCCATCATTCATATGTTGACCAGATATGCACGCTCCCAATTTGTGGATCCAAATAAAGCGGATCTGGAAAATGAAAAGTTTTACCCGGAGTCCTATGAAagtgaagaagatgaagatgaggaAGATAATGATGAGGAAAATGGTgaagaagataaaaaaaagaagaaacctTATATCATGGATCCTGATCACAGATTATTGTTGAGAGTCACTAAGCCTCTGCTGCAAAGCAGAAATACTGCAGTTGTCATGTCTGTAGCAAGACTTTATCACCACTGTGCTCCATCTAGTGAAGTAGGACTTGTAACAAGGGCAATGGTTAGGCTACTGAAAGGACACAGGGAAGTTCAACATGTAGTGCTCAGTAATATTGCTACCCTCTCTGCGACCAGGAAGGGAATGTTTGAGCCACACCTAAAGAGTTTCTTTGTACATTCTAATGATTCAACTCATATTAAGATGCTTAAGCTTGAAATAATGACCAATATTGCTTCAGAagcaaatatttcatttttgctAAGGGAATTTCAGACTTATATCAACAATGCTGACAAGCAGTTTGTAGCATCAACCATACAAGCTATAGGTCGATGTGCTTCTACTATTCCAGAGGTGACAGACACATGTCTAACTGGTTTGGTGAAATTGTTATCCAATAGAGATGaaACTGTTGTTGCTGAAAGTGTTGTTATGATCAAGAAATTACTTCAGTTGAAGCATAAAGATAAGTCTCAGATTATCTCACAGATGGCAAAGATTCTGGATAAAATCACAGTACCAATGGCCAGGGCTAGTATCATGTGGCTGGTTGGAGAATATGCTGAACGTGTACCAAAAATAGCACCAGATGTTTTACGGAATGCTGCAAAAACGTTTGTGAAAGAGGAGGATATTgtgaaattacaaattatcAATTTGGGGGCCAAGCTCATATTAATAAACCCTAAACAGACTCAACTTTTATGTCAGTATGTCCTCAATCTTGCAAAATATGACCAGAGTTATGATATAAGAGACCGCTCGAGATTCCTGAGACCAATAGTATTTCCTGGAGAAAAGAGTGGTCAACTTGTCAAGCATTCCAAGAAGATTTTATTAGCATCCAAACCACCGCCTGTTTTAGAATCCGTTTTTAAAGATCATGGTGAATTTATGCTTGGTTCACTCTCGCACCTACTAAACGCAAGAGCATCTGGTTACCAAGAGCTCCCAGATTTCCCTGAGGTACCCCCAGATCCTTCGGTTAGGAATGTCGAGGTTGAACCCTTGTGGGAGAAAAAGACGAAGAAGACTAAACCTAAGAAATCCACCTTCTATTCCAGCGAGTCTGGTTCAGgATCTGGCTCTGAATCTGAATCAAGTAGTGGAAGCggaagtggaagtggaagtggaagtggaagcGGAAGCGGAAGCGGAAGCGGAAGTGagagtgaaagtgaaagtagTACTGGCAGCGACAGTGAAAGTAAATCATCGATGGAGTCTTTATCTGGAAGTGTAATTGaTTCTTCAAGTGAAGAGGAAGAGAAGAAAAAAGTAAGGAGAAAGAAACAAACTGATAGTGAAACTGAAAGCAAGGAATCCCAGTCAAGTCAAGAAGAGTCAGAAAGTGAGGCTTCATCAGTAGAATCGACAAAAAGTGAATCAGACAGCGAAAAGAAAAAGGTTCAACCGAAGAAAACAGAGAAATCTACTCCCAAACCAAAAGCTAAAAAAGAGGATGAGGTGCAAGAAAGACCTCCTTCAACAGATCAGCTGCTTTTCTTTGACGAGGAAGTGGTTCCAATAGTCAACAATACTGGGCACAACTATGCAAAGATCTTCTCTCCTTCACTTGTGGATGACATGAAATCTCTTTCATTGGGCTCCACTACTAATGGTCCTACTTCAGTCGTTCAAACTgTCATATCAGACATCTCCAAGTTAACTTCCTACGAACTGCTGAACAAAATCTCTGGTCAAGGTTTGCAGGCTCAATATAGATTGCCTCGCAGTCCGTGTATTTACTCGACAACAATGGTCGCGATAGAAATCCTCTTTATTAATAAAAGTGGGTCTGTTATTGAAAATATTCACGTAGGAGATAAGAAGCTAAGCCTTGGTGTGAAAATGAGCGACTTTCCTACTATAGAGTCATTAGATGCCGGTGCAACGGTCACAGTTACGATGGGTGTTGATTTTAAGGATACCATACAACCAGCCAGTTTTGAAATATGcacCAAAACAAGCAAGTTCTCTGTTAAAGTGAAAAGTCCTATGGGAGAACAATTGCAAGCGCGACCAATCACCGAGCAAGATTTTATCTCTCTACAAAaaaaactaTCTGGTATGAATGAGAGTTCCTTGAACGTGGATGTCCCTTATGAAAATTGCGATGAAAGGAGCCTTGTTGCAAGAGTACGCGAGTCTTCAAATGTAGCGGTCTTGCCCCATACAGTTTCTTCTGCAGACACAACTTATAGATTTTCTGGCTCTGCTGTCTCGTCTGGAGTCCCTGTTCTTATTGCTATAGTCGTGAAAAAAGATGGCGAAGCCAGTAAAGTGACTGTTAATTGTGAAAAGATGACCATTAACTCGATTTTGGCAAAAGAACTAGCAGCCGCTATCAAGAAGGTAGTCTGA

Transcript

ENSFVQT00000032104

cttggatctTCCGCTCGGGAAATCTAACCTTGAGGCTTGAGTGAAAGTTGAAAGTAAAACCTTGCGTTTGTTTTACGACAATGGCGTACAACGACGAGGGCGATCGGGAAATAGGAGAAACGTCTTCTGGGGGAATTTTTGCCGGAAAATTTAAACGACATGCCGATCTTAATGAGCTGTTGGATAGTGGCAAGGATAACCATAAATTGGAAGCTATGAGACGTATTATTGAGAGTATATCAAGTGGTAAAGATGTTTCCCAATTGTTTGCTTCTGTTGTGAAGAATGTTGTCTCCAAAAATACAGAGATCAAAAAGTTAGTTTATGTTTACTTGGTACGTTATGCAGAAGAACAACAAGACTTGGCATTACTTTCTATCAGTACATTTCAAAAAGCTTTGAAGGATCCAAACCAGCTAATTAGAGCAAGTGCATTAAGAGTGTTATCCAGTATAAGAGTTCCAATAATTATACCAATTATGATGCTGGCTATTAAAGAGGCTGTAACAGACATGTCTCCATTCGTGAGGAAAACTGCATGCCATGCCATACCAAAACTTTACAGTTTGGACCCTGAGCTAAAGGAACCATTGATAGAAGTTATCGAAAAACTTTTAAAGGATAAAACTACACTTGTTGCTGGCAGTGCAGTGATGGCATTTGAAGAACTTTGTCCAGACAGGGTTGATCTAATTCAtaaaaattatcgaaaactGTGTAATTTATTGGTGGATATTGATGAATGGGGACAGTCAGCCATCATTCATATGTTGACCAGATATGCACGCTCCCAATTTGTGGATCCAAATAAAGCGGATCTGGAAAATGAAAAGTTTTACCCGGAGTCCTATGAAagtgaagaagatgaagatgaggaAGATAATGATGAGGAAAATGGTgaagaagataaaaaaaagaagaaacctTATATCATGGATCCTGATCACAGATTATTGTTGAGAGTCACTAAGCCTCTGCTGCAAAGCAGAAATACTGCAGTTGTCATGTCTGTAGCAAGACTTTATCACCACTGTGCTCCATCTAGTGAAGTAGGACTTGTAACAAGGGCAATGGTTAGGCTACTGAAAGGACACAGGGAAGTTCAACATGTAGTGCTCAGTAATATTGCTACCCTCTCTGCGACCAGGAAGGGAATGTTTGAGCCACACCTAAAGAGTTTCTTTGTACATTCTAATGATTCAACTCATATTAAGATGCTTAAGCTTGAAATAATGACCAATATTGCTTCAGAagcaaatatttcatttttgctAAGGGAATTTCAGACTTATATCAACAATGCTGACAAGCAGTTTGTAGCATCAACCATACAAGCTATAGGTCGATGTGCTTCTACTATTCCAGAGGTGACAGACACATGTCTAACTGGTTTGGTGAAATTGTTATCCAATAGAGATGaaACTGTTGTTGCTGAAAGTGTTGTTATGATCAAGAAATTACTTCAGTTGAAGCATAAAGATAAGTCTCAGATTATCTCACAGATGGCAAAGATTCTGGATAAAATCACAGTACCAATGGCCAGGGCTAGTATCATGTGGCTGGTTGGAGAATATGCTGAACGTGTACCAAAAATAGCACCAGATGTTTTACGGAATGCTGCAAAAACGTTTGTGAAAGAGGAGGATATTgtgaaattacaaattatcAATTTGGGGGCCAAGCTCATATTAATAAACCCTAAACAGACTCAACTTTTATGTCAGTATGTCCTCAATCTTGCAAAATATGACCAGAGTTATGATATAAGAGACCGCTCGAGATTCCTGAGACCAATAGTATTTCCTGGAGAAAAGAGTGGTCAACTTGTCAAGCATTCCAAGAAGATTTTATTAGCATCCAAACCACCGCCTGTTTTAGAATCCGTTTTTAAAGATCATGGTGAATTTATGCTTGGTTCACTCTCGCACCTACTAAACGCAAGAGCATCTGGTTACCAAGAGCTCCCAGATTTCCCTGAGGTACCCCCAGATCCTTCGGTTAGGAATGTCGAGGTTGAACCCTTGTGGGAGAAAAAGACGAAGAAGACTAAACCTAAGAAATCCACCTTCTATTCCAGCGAGTCTGGTTCAGgATCTGGCTCTGAATCTGAATCAAGTAGTGGAAGCggaagtggaagtggaagtggaagtggaagcGGAAGCGGAAGCGGAAGCGGAAGTGagagtgaaagtgaaagtagTACTGGCAGCGACAGTGAAAGTAAATCATCGATGGAGTCTTTATCTGGAAGTGTAATTGaTTCTTCAAGTGAAGAGGAAGAGAAGAAAAAAGTAAGGAGAAAGAAACAAACTGATAGTGAAACTGAAAGCAAGGAATCCCAGTCAAGTCAAGAAGAGTCAGAAAGTGAGGCTTCATCAGTAGAATCGACAAAAAGTGAATCAGACAGCGAAAAGAAAAAGGTTCAACCGAAGAAAACAGAGAAATCTACTCCCAAACCAAAAGCTAAAAAAGAGGATGAGGTGCAAGAAAGACCTCCTTCAACAGATCAGCTGCTTTTCTTTGACGAGGAAGTGGTTCCAATAGTCAACAATACTGGGCACAACTATGCAAAGATCTTCTCTCCTTCACTTGTGGATGACATGAAATCTCTTTCATTGGGCTCCACTACTAATGGTCCTACTTCAGTCGTTCAAACTgTCATATCAGACATCTCCAAGTTAACTTCCTACGAACTGCTGAACAAAATCTCTGGTCAAGGTTTGCAGGCTCAATATAGATTGCCTCGCAGTCCGTGTATTTACTCGACAACAATGGTCGCGATAGAAATCCTCTTTATTAATAAAAGTGGGTCTGTTATTGAAAATATTCACGTAGGAGATAAGAAGCTAAGCCTTGGTGTGAAAATGAGCGACTTTCCTACTATAGAGTCATTAGATGCCGGTGCAACGGTCACAGTTACGATGGGTGTTGATTTTAAGGATACCATACAACCAGCCAGTTTTGAAATATGcacCAAAACAAGCAAGTTCTCTGTTAAAGTGAAAAGTCCTATGGGAGAACAATTGCAAGCGCGACCAATCACCGAGCAAGATTTTATCTCTCTACAAAaaaaactaTCTGGTATGAATGAGAGTTCCTTGAACGTGGATGTCCCTTATGAAAATTGCGATGAAAGGAGCCTTGTTGCAAGAGTACGCGAGTCTTCAAATGTAGCGGTCTTGCCCCATACAGTTTCTTCTGCAGACACAACTTATAGATTTTCTGGCTCTGCTGTCTCGTCTGGAGTCCCTGTTCTTATTGCTATAGTCGTGAAAAAAGATGGCGAAGCCAGTAAAGTGACTGTTAATTGTGAAAAGATGACCATTAACTCGATTTTGGCAAAAGAACTAGCAGCCGCTATCAAGAAGGTAGTCTGAGGCAAAACCAGTTTGCTGAGCAAACAGAATCGACACGAAAGATGGAGGGGAAATTTGGCAAGCACTTGGGATTTGGTGGTTTGGGAACTCACCTTTACTAGGGAAAcactgaaataaattatattgaaaTTGGTAGAATCTTCGGTGGGACATTGTATGGAATCATCAATTGTTGTTGaacgttaattttttttatatgtgAAGATGGTGTTCGCGTGGATCACTGGGGACCACAGGAGGTTATCGAGGACAGTGTGAAATCATTAAACACATCGTGCATCACTATAATGTTCATTCAATCTTCGAGTTCAACAACATACCAGAAATTCAATGCAAAGGAAAGCTAGGCAATTGTCAGTGAAATGGTGGAATATATGGAATGCATTTATTTAGTTAAAACAAGCGGCGGGTATTTCCATAAAATGGAGCATTGAGCTAAGTAAGGCATTACAAAAAAGAACACTTTATTGCATCGCAGTCTTCaataattatattcaattttccACAGTGTACGTGACGAAcagcttgaaatcgaggttgagTAAGGAAGATAACAGTAATTTGTAATTGTATTTCCTATTGTCAACCTCGAATTGAAGACATTTTGTTTCGTGGGAATTAAAGAAAATTCAGTCTTTGTTCGGTTAAGCAGAATGCTGACATCAACATAGATCTGTCTAGATCTGTATAAAAGAAATCCATTTCGAAATAGGATTTGACTCAGTTTTTTAATAAGAATTTGATGCTTGTAACAGAGAAAAATATCATTCTGAAAAGAAGTCTTGCAAATGCAAGACTTGAGAAAAGAAGACAAGAATAaaatatagttttttttttaatcttatgTTTTTGACCTCAGTGTCCTTGAgtttacaaaattttattggaatttgctttgtttttaacttcttgaaagaaatttaaaataacgaGAACAAAAACGGATTATTAAATACACGAACGAAACACTTCAAAATCGCTTTTCTGATCTATTGTTTG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14796 all species →	AP3B1_C	Clathrin-adaptor complex-3 beta-1 subunit C-terminal	Family	Interproscan
PF01602 all species →	Adaptin_N	Adaptin N terminal region	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026739 all species →	Family	AP complex subunit beta	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR029390 all species →	Domain	AP-3 complex subunit beta, C-terminal domain	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR002553 all species →	Domain	Clathrin/coatomer adaptor, adaptin-like, N-terminal	Interproscan
IPR026740 all species →	Family	AP-3 complex subunit beta	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11134 all species →	ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0030117 all species →	Cellular Component	membrane coat	Interproscan
GO:0030123 all species →	Cellular Component	AP-3 adaptor complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12397	AP3B; AP-3 complex subunit beta	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.