Gene detail

Detailed information of ENSFVQP00000030494.1 in Callogorgia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Callogorgia gracilis · all data for this species · gene families

Sequence

CDS

ENSFVQT00000034264

atgagcagcccAAAATCCACAGCCAATGAATTGGAACCAGCCATAGATGGAAGTTCCCTCAGTTTTCAAGACTTAAGAAAATTCTTTCACAGTGCCAGTGGCAGTGACATCACAAAAAACATCACAGAACCCGGTCTCGGACATGTGGGCTGTAGTCCGCCAAAGCCACGACCTCCTTTGCCTCCAATACCACCTAAACCTGCTGTTCGTGTAGCTGTAAAGCCACAAGCCGTTGGCAGTCTCAATGGAGTTAGGGAGGACAAGGCGGTCGTAAATGATTCAAACTCTGTGGACAATTTTCACGATGATTTGAATCACCCTACAGCAGAAACTCCAAATGGTAATGCGAACTCGTTGGAGGAAACTAATGGTAATTCTGCAGATGAAAATCATGTTGACCATTTGGAAACCATGGAACCCAGGGAATATGATAAGGACGATGAAGAGTCTGCAGGGATGTATGGGGAAGACGATGAAAATTACGATGGCTGGGGGTCGGAAGAGTTTTCAAGCGATAGTGACAGTGATCACAACGAAGACCAATGCCAGAATAAAAGGCAAAGCATGGTGATTTTTAATGAACTAGATGGAATACCAGAAGTTGTTATTCTTGATACtcggaaaagaaaaatttataaCATTGTAAAAGAAATTCTCACAACTGAGATCACATATGTCAAAAACCTGAAACTTCTTGATGATATGTTCTTCTTCCGACTTGATAACGAATGCCGAGCAAAGAATATTATACCCAAAGAAGCTTTGCTGGAAATATTCTCGAACATCAAAGCTATCCACCAGTTTCACCGGGACTTTCTCTTGCCGAAACTGGAAGAACGAATGACAAACTGgGATAAGACACCTAGAGTTGGagatattttcaaaagtttaGCACCATTTCTTAAGCTGTACGTGGAGTATGTGAAAAACTTCGACCAGGCAATGAACAGTTTAAGAAAATGGAAATTAAAGTCTCAAAAACTGGCAGCAATAATAGAAGAGATTCAGAAAACAGAAGAGTGCAATTACCTTACTTTGGAACATCATATGCTTGGTCCAGTTCAGAGAGTACCACGGTATAAACTGTTATTAAGAGACTATATCTCCAAATTGCCTGAAGATTCAGATGACTTGGAGGAATCAAACAAAGCCCTTGAGATAATCACCTCTGCTGCAAACCACGCCAATGAAAGTATGAAAAAGACAGAACGCTTTCAGAAGATGTTGGAAATGCAAGAGAAATTCCCTGAGGGAATAAGCATCATAACGCCCAGCAGGGAGTTTATCATGGAAGGTGAACTAGTTAAGATTTCTGCAAGAAACGGACAACCTTTGCCGAGAATCCTTATTTTGTTCAACGATACCATTTTCTGCTGTACCAAAGTGGCCGCAACAGGCAAGTACAAGGTGAGGCAGGAAGCCGAGCTCAAGGACTCTCAAGTCGAAGAAACGGAAGAGGAAATCGGAAATCGGGAGCTCGTGTTTCGAGTGCTCGGCAACCGCAAGGTGATCGATTTCCAGGCGAGCTCGGCGGAAGAAAAAGAGAAATGGGTCGAGGCGCTTAACACCGCGATAAAAAACGCCAAAGATAAGAAGGGTACGTTCGGAGCCATTGAGTTGCCCGTGTTGGCCGAGGACCAGCTGGGCAAGATCGCGCCTGTCTGGGTGAAGGACTCCGCTGTCTCCATGTGCATGGAGTGCACGATGGCGTTCACGACTTTGAAACGGCGGCATCATTGCCGCGCTTGCGGGAAGATTGTGTGCAGCAATTGCTCCGGTTACAAGGCGCCGTTGGAGTACGATCACGACAAGCCGAACAGAATTTGCTCGAGCTGCTTCAAGATCATCACGAAGGGACAGGCGGCGAAGGGGACGAAGAAAGCGAACAAAGAAGCGAGACCGAAGAAGCGAGTGGTGTACGCCGATTCCGTGATCAACGGTTACTTGAATTACAGGGGGGAGACCTCGAAGGCCTGGTCGAAAAGGTGGTGCAGTTTAGGCAACGATTTCACGCTTCATGTCTTTCGAGCGAAAAAGgaTATTAAGGCCCAGACCACAATACCGCTTCCAGGCTTTGAAGTGAAAGACCACAGTACACTTGATGAAGCGGATAAACTAAGTGGAAAACACGTTTTCAAAGTTTCTCACAAAGGTTATGGATCGTTCTTGTTTGACGCAGACGGCGATGAGAACTTTGAGAGTTGGCTTTTGTCCATCGGTTACGCCATCAAAGCTGAAGcgcctccctctccctctccctcagCCAATAGCTCTGTTTCAAGTCCACCGTCAACTCCAACACCTATGTCTCCATAA

Transcript

ENSFVQT00000034264

GCCGAAACCAGAAACCACGAACTTTTTCGGAATCTGTCGGTTCAGGCTCGGGGGCGAAGAATCATACCATTCATGTCACCACTTCCTGGTTTAATCGTAGGTTGTATCCGTATTAATAATATGGTGTGTGAAATGtgaatgcatttttatgtTGTTCAAGTGTAAAGCTGCACCTCTTTCGTTTCTGCTTGGTGAGATCAGTGGTTGTTGCATGGCCACCGTAAGTTAACAAATCTGGAAGTTTGTGACTACCACATCAGCTGGGATAGTAAGAAAGAAGCCCAAATCATTcttaaaacatgagcagcccAAAATCCACAGCCAATGAATTGGAACCAGCCATAGATGGAAGTTCCCTCAGTTTTCAAGACTTAAGAAAATTCTTTCACAGTGCCAGTGGCAGTGACATCACAAAAAACATCACAGAACCCGGTCTCGGACATGTGGGCTGTAGTCCGCCAAAGCCACGACCTCCTTTGCCTCCAATACCACCTAAACCTGCTGTTCGTGTAGCTGTAAAGCCACAAGCCGTTGGCAGTCTCAATGGAGTTAGGGAGGACAAGGCGGTCGTAAATGATTCAAACTCTGTGGACAATTTTCACGATGATTTGAATCACCCTACAGCAGAAACTCCAAATGGTAATGCGAACTCGTTGGAGGAAACTAATGGTAATTCTGCAGATGAAAATCATGTTGACCATTTGGAAACCATGGAACCCAGGGAATATGATAAGGACGATGAAGAGTCTGCAGGGATGTATGGGGAAGACGATGAAAATTACGATGGCTGGGGGTCGGAAGAGTTTTCAAGCGATAGTGACAGTGATCACAACGAAGACCAATGCCAGAATAAAAGGCAAAGCATGGTGATTTTTAATGAACTAGATGGAATACCAGAAGTTGTTATTCTTGATACtcggaaaagaaaaatttataaCATTGTAAAAGAAATTCTCACAACTGAGATCACATATGTCAAAAACCTGAAACTTCTTGATGATATGTTCTTCTTCCGACTTGATAACGAATGCCGAGCAAAGAATATTATACCCAAAGAAGCTTTGCTGGAAATATTCTCGAACATCAAAGCTATCCACCAGTTTCACCGGGACTTTCTCTTGCCGAAACTGGAAGAACGAATGACAAACTGgGATAAGACACCTAGAGTTGGagatattttcaaaagtttaGCACCATTTCTTAAGCTGTACGTGGAGTATGTGAAAAACTTCGACCAGGCAATGAACAGTTTAAGAAAATGGAAATTAAAGTCTCAAAAACTGGCAGCAATAATAGAAGAGATTCAGAAAACAGAAGAGTGCAATTACCTTACTTTGGAACATCATATGCTTGGTCCAGTTCAGAGAGTACCACGGTATAAACTGTTATTAAGAGACTATATCTCCAAATTGCCTGAAGATTCAGATGACTTGGAGGAATCAAACAAAGCCCTTGAGATAATCACCTCTGCTGCAAACCACGCCAATGAAAGTATGAAAAAGACAGAACGCTTTCAGAAGATGTTGGAAATGCAAGAGAAATTCCCTGAGGGAATAAGCATCATAACGCCCAGCAGGGAGTTTATCATGGAAGGTGAACTAGTTAAGATTTCTGCAAGAAACGGACAACCTTTGCCGAGAATCCTTATTTTGTTCAACGATACCATTTTCTGCTGTACCAAAGTGGCCGCAACAGGCAAGTACAAGGTGAGGCAGGAAGCCGAGCTCAAGGACTCTCAAGTCGAAGAAACGGAAGAGGAAATCGGAAATCGGGAGCTCGTGTTTCGAGTGCTCGGCAACCGCAAGGTGATCGATTTCCAGGCGAGCTCGGCGGAAGAAAAAGAGAAATGGGTCGAGGCGCTTAACACCGCGATAAAAAACGCCAAAGATAAGAAGGGTACGTTCGGAGCCATTGAGTTGCCCGTGTTGGCCGAGGACCAGCTGGGCAAGATCGCGCCTGTCTGGGTGAAGGACTCCGCTGTCTCCATGTGCATGGAGTGCACGATGGCGTTCACGACTTTGAAACGGCGGCATCATTGCCGCGCTTGCGGGAAGATTGTGTGCAGCAATTGCTCCGGTTACAAGGCGCCGTTGGAGTACGATCACGACAAGCCGAACAGAATTTGCTCGAGCTGCTTCAAGATCATCACGAAGGGACAGGCGGCGAAGGGGACGAAGAAAGCGAACAAAGAAGCGAGACCGAAGAAGCGAGTGGTGTACGCCGATTCCGTGATCAACGGTTACTTGAATTACAGGGGGGAGACCTCGAAGGCCTGGTCGAAAAGGTGGTGCAGTTTAGGCAACGATTTCACGCTTCATGTCTTTCGAGCGAAAAAGgaTATTAAGGCCCAGACCACAATACCGCTTCCAGGCTTTGAAGTGAAAGACCACAGTACACTTGATGAAGCGGATAAACTAAGTGGAAAACACGTTTTCAAAGTTTCTCACAAAGGTTATGGATCGTTCTTGTTTGACGCAGACGGCGATGAGAACTTTGAGAGTTGGCTTTTGTCCATCGGTTACGCCATCAAAGCTGAAGcgcctccctctccctctccctcagCCAATAGCTCTGTTTCAAGTCCACCGTCAACTCCAACACCTATGTCTCCATAACAACCGCAATGATAATACATAGACATAGCTGTGTATGGTATTTCGGCTCAACTATTTAGgtgataaaacaaatattatggAAATTAGAGTGAgtaaccaagatgaaataaTAGAGTGAAATCGATCAATACCGTACACGAACTATAAAGTTAGTCGTTCAATCGctcaaaaataatttgaaatgcatAATTTGTAAACTATCAGTTAACCTTTCATGGTATTTGTACTCAATTACCTGGATAGTAGTTCTATAGTCGACCGATTTGAAGTGGCTAACCAAGATGAAATCTTTCTGTAAAGTTTGAGAATAATTTTGACTATTTTGTTTGACTATTCTTGCTGGTTTTttttcccgcttctttttagctgacgtcagcattaacCAAATTTGCGAGGTTACTAAGTTTTGAGCGCTTTGATCTCGAAACAAACGTGACATCGAGAAAAATTCTCCTCTcaatctttaaaatattaatttggtCGAAGGGACATATTCGTTGCCAAATGTTTCCAAATGTTTTTGTAATTCGTGTGATCCAACAGCTGTTGAATTTCAAGTTACTGTGTTTCCATTAGTTCGAGGCCAGAAGACCGAGAAAAACGTTGATTTAGATGTAGTGGttcttaattttttaagaAGGATTACCCCGAGAGTATCTGTTGCTGGTTTTTTTTACAGTATAATTGAttataaaatgcttttgaGGCTGTGTACATGAGCCGAGCTTGTTCGAGATCAGACTATACAATAGACACTCGAGATAAAGATAAAGGATtgatttcgagcgttggcccttcgttagagagaaacataaaatgaataatgaaccgagtaaatttatatttaagaaatagaaaacattttccgtgtttccatacagttatagaaacacgagtggaagtttactgggagaacgagaaattgaagtgggaacacgagcctgtagggcgagtgttttcacgcaatttcgagttctctcaaacctccacgagtgtttc

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00621 all species →	RhoGEF	RhoGEF domain	Domain	Interproscan
PF01363 all species →	FYVE	FYVE zinc finger	Domain	Interproscan
PF00169 all species →	PH	PH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000306 all species →	Domain	FYVE zinc finger	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR000219 all species →	Domain	Dbl homology (DH) domain	Interproscan
IPR051092 all species →	Family	FYVE, RhoGEF and PH domain-containing	Interproscan
IPR017455 all species →	Domain	Zinc finger, FYVE-related	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR035899 all species →	Homologous_superfamily	Dbl homology (DH) domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12673 all species →	FACIOGENITAL DYSPLASIA PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005089 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0007010 all species →	Biological Process	cytoskeleton organization	Interproscan
GO:0046847 all species →	Biological Process	filopodium assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05723	FGD4; FYVE, RhoGEF and PH domain containing 4	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.