Gene detail

Detailed information of ENSFVQP00000030995.1 in Callogorgia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Callogorgia gracilis · all data for this species · gene families

Sequence

CDS

Transcript

ENSFVQT00000034818

TGTCGATTTCTTAAGGACCAATAACCGCTGAGACTGAATACAAAGACGTCCCAGTGAGGTgtgtatatttaataattatgttgGTACACACACGTAGACACAGACAAACCAACATCTACACACCCACACACTCACAGTGACATTTGAAAAAGTATTTTAATTCCCTTCATAATTCTGTGTGTCTTAATAGCTATAAAAGTCCTGTAGAATGTTACGCTGAGAAAGTTTTGATTACTGCCAATGCAGAAGAGAGTATGTGGGTTGATAGTGAACGAAGAAGATATGCCATTTACTGATCAGGGAATACGTCCAGATATCATTATGAATCCTCATGGCTTTCCATCTCGTATGACGGTTGGTAAACTCATTGAAATTTTGGCAGGAAAAGCTGGAGCTGTGGAGGGAAAATTTCATGACAGCACAGCTTTTGCTGGCGACAAAGTGGAAGATTTATGCCAAATTTTAATCGATCATGATTTTCACTATGAAGGAAAAGACTACGTCACTTCCGGCATCACGGGTGAAGCACTGAgtgcctatatatatactggacCTGTTTACTATCAGAAACTCAAGCACATGGTTGTGGATAAGATGCATGCAAGGGCCAAGGGACCACGTTCTGTGTTGACCAGGCAACCGACAGAAGGAAGGTCAAGGGATGGTGGATTACGATTAGGTGAAATGGAAAGGGATTGTCTGATTGGCTATGGTGCAAGtaaTTTATTAATGGAGCGTTTGATGATCTCCAGTGATCAATGTGAAGTTGATGTTTGTAACAACTGCGGACTTCTCGGATACTCAGGATGGTGTCATTTCTGTCAATCATCTTACGATATATCATCACTCAAGATTCCATACGCATATGTTTACACAAAGAAAACCGTTGTTGAAATGGACGTCAAGAGATCAAGGAAAGATAAGCCAGTAAATGAACAAATATATTGGTCAAAAAGGCAAAGAAAAATATGGGTTTGTATATTGTTTTTGGGCTCTGTTATGTCGTACGTGACAAGAGTTGCTGGACCTGTAACTGTGGTCGCTATGGGACAAGATTTGAAATGGGATAAAACTGTTGCTgGTGAAGTCCTATCCATATTTTTCTGGGGATATTCTGTGACACAAGTTGTTGGGGGATGGTTGAGTGATACTTACGGCAGTCAAAACGTTCTTGTTTATTCCTGTTTTTCTTGGGCAATATTGACATTTATAACACCAATTGTTGTTAATCCTGAATATACTATTTATTTTTCACCAACGCAAGCCCTACTAGTCTTACGATTTTTATTTGGAGCTCTTCAAGGAGTAATTTTCCCTGCAACATATAGTTTAATGGGGAAAAGAATTGCACCTAAGGACAAGTCATTGTGCACTAGTATTGTGGCATCTGGCATATCTGTTGGttCTGTGATCTCTGGCAGTCTTGGTTCTATAATAATGTCTTACGTTAACTGGCATatggtttattatatatttggaGGAGTTGCTCTTCTCTGGGTTGCTTCATTAAAATACTATGCTATGCACAATGATATTCCTGTGTCCAAGACAACACACAAAGAACAGTCCCTACCAGTCCCCtggaagaaaatattttcaaaaccaGCAATATGGGCCGTTATAGTGGCAGCATTCTGTCTTGGAACATGTTTTGACATGTTGTTTGCATGGATGCCAACATATTTCCATGATAATTACCCAGATAGCCAGGGTGTCATTTTCAATGTGGTACCATGGATGGGTCATCCTCCAATAGCCATCATATCTGGATCATGTGCAGATCACATGATTAAATCAGGTTACACCAACACATTTGTTCGAAAGTTGTTTCAGACCTTTGCCATGCTTGGACCAGCAGTTGCTTTACTTCTCATGGACTATTTTCCTAGTTTTTGGTACGCAATATTCCTCATGACTATAGCTGTGTCATTTTGTGCATTCAATGCAAGTGGAGCCAACGTTCAAGTACAAGAACTTGCACCAAACTATGTCGGTTTTGTTTATGGTGTTATGAACACAATGGGATCTATACCAGGTTTTATTGGAGTGTATGTGACTGGCTACATTCTTGAAACTACTGGAAACTGGACACTAGTTTTTCAAGTAACAGCATTGATATCCTTCTTTGGTTGGGTTGTGTTTGTAATTTTTGGTTCCTCGAAACGACAAGTATGACACCTTCTAGGAAGAATCACATGGACAATCAAGATGTCACTCATTTTTGGAACATGTGGACGTCTCATAATTAACATGTGGACAGGTTATAATTAACATGTGGATC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04560 all species →	RNA_pol_Rpb2_7	RNA polymerase Rpb2, domain 7	Domain	Interproscan
PF00562 all species →	RNA_pol_Rpb2_6	RNA polymerase Rpb2, domain 6	Domain	Interproscan
PF07690 all species →	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007641 all species →	Domain	RNA polymerase Rpb2, domain 7	Interproscan
IPR007120 all species →	Domain	DNA-directed RNA polymerase, subunit 2, hybrid-binding domain	Interproscan
IPR036259 all species →	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR015712 all species →	Family	DNA-directed RNA polymerase, subunit 2	Interproscan
IPR020846 all species →	Domain	Major facilitator superfamily domain	Interproscan
IPR044777 all species →	Family	Solute carrier family 17 member 9-like	Interproscan
IPR011701 all species →	Family	Major facilitator superfamily	Interproscan
IPR037033 all species →	Homologous_superfamily	DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20856 all species →	DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003899 all species →	Molecular Function	DNA-directed 5'-3' RNA polymerase activity	Interproscan
GO:0006351 all species →	Biological Process	DNA-templated transcription	Interproscan
GO:0001056 all species →	Molecular Function	RNA polymerase III activity	Interproscan
GO:0005666 all species →	Cellular Component	RNA polymerase III complex	Interproscan
GO:0032549 all species →	Molecular Function	ribonucleoside binding	Interproscan
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSFVQP00000030995.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.