Genomic Location: not available for this species
NR annotation: XP_020609892.1, high mobility group protein B3-like isoform X1 [Orbicella faveolata]
Species Echinopora horrida · all data for this species · gene families
| CDS |
| ENSJVNT00000002034 |
| Transcript |
| ENSJVNT00000002034 |
| Protein |
| ENSJVNP00000002005.1 |
| UniProt accession | Description |
|---|---|
| Q42344 | High mobility group B protein 4 OS=Arabidopsis thaliana OX=3702 GN=HMGB4 PE=1 SV=1 |
| Q75B82 | Non-histone chromosomal protein 6 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=NHP6 PE=3 SV=1 |
| P26585 | HMG1/2-like protein OS=Glycine max OX=3847 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002244 (this species only) |
| Transcription factor family | HMG · all TF in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF09011 all species → | HMG_box_2 | HMG-box domain | Domain | Interproscan |
| PF00505 all species → | HMG_box | HMG (high mobility group) box | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036910 all species → | Homologous_superfamily | High mobility group box domain superfamily | Interproscan |
| IPR009071 all species → | Domain | High mobility group box domain | Interproscan |
| IPR050342 all species → | Family | High Mobility Group Box (HMGB) | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR48112 all species → | HIGH MOBILITY GROUP PROTEIN DSP1 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0008301 all species → | Molecular Function | DNA binding, bending | Interproscan |
ENSJVNP00000002005.1.
