Gene detail

Detailed information of ENSJVNP00000016037.1 in Echinopora horrida

Genomic Location: not available for this species
NR annotation: XP_020629946.1, uncharacterized protein LOC110067018 [Orbicella faveolata]
Species abbreviation EHORR · all data for this species · gene families

Sequence

CDS

ENSJVNT00000016161

ATGGCTAGCCCCCTCCATGAGTTAACAAAGAAAGGGACGAAATTTGTTTGGACGGAGGCCTGTCAGATTGCATTTGATGCCTTGAAGAAAGCCTTCACAGAGGCTCCAGTCCTCTCGTACCCAGATTTTACGCAGCCGTTCCTCCTGTCCACTGATGCAAGTGACGATGCCCTTGGTATGGTTTTGggacagaaacaaaatggccgcGAAGTTGTAATAGCGTATGGAGGCCGCAAGCTAATCCCTGCAGAAAGGAATTACAGTGTCACAGAAAGGGAAGCCCTAGCGGTAGTCACTGGTATCAAACATTTCCAGCATTACTTGTACGGACGCAAGTTCACTGTGTTCACAGACCACAATGCTGTACGCTGGCTGATGAACATAAGAGAACCGACAGGTCGCCTAGCAAGATGGGCGTTAGTCTTACAGCAGTACGACTTTGAGATCGTCCACCGTGCGGGCAAGAATAATGGGAACGCCGATGCCTTGTCACGTCGTCAGTATCAGCCCACTTTAGCGACTCTCGACTGCCCTGGAGTCCAGACTGACAAAATTCGCGAGTTGCAACGCAGGGACCCTTCCTTAGCAGATATTATCAACTATTTGGAGACTGAAAGCCTACCTAAGGACGGTGCTGCTGCCAAGGCCTTGCTGCACTCCATTGAGGACTACTTTCTGGACCCCGATGGTGTCTTATGTCATATTTACATTCCCAGAAACCGACGAGTGGCCACACCTCGGACACAGTTGGTCGTGCCGCCTCCCCTAAGGCATGAGATCCTGATTGGAGGACACGATCATCCTACAGCTGGTCACTTGGGAGTCAATAAAACCTATGACAAACTCAGAGATCGTTATTTTTGGCCGAAAATGTTTGCTGACGTTCAACATTGGGTCTTGTCCTGTTCACACTGTCAGATGAAGAAAAGTCCCAAACAGCGCCAGACAGCTCCAGTCTTACCCATTGCTGTAGAAGGACCGTTTCACCGCGTTGCCGTTGACTGTCTGGGACCATTTCCGGTTACCAACTCTGGTAATCGTTATATTGTGGTTTTCAGCGATTATTTAACTCGTTTTCCAGAGGCTTTTGCAGTACCCTCAATTGATGCTGCTACGATTGCAGATTTGCTGGTCAACGAGATCATGGCACGACATGGAGCTCCCCGAACTCTGTTATCAGATCGTGGCTCGAATTTTCTATCCAGCCTGCTGAAAGAGGTCTGCTATTTAATGGATACGAAGAAGGTTTTTACAACCTCTTATCATCCACAATGTGATGGGCTTGTGGAGAGATTTAATGGCACCCTCGCTCAAAGTCTTTCTATGTACGTCAGCAGTGATCAGAAAGACTGGGACAAGTACTTGAACCCCGTCCTTTTTGCCTATCGTGTCTCCCCATCTGACGTCACAGGCGAATCGCCTTTCTACATGCTGTATGGGAGAGAGCCACGCTTACCTATGGATGTTTCCCTACTTCCTCCGCGGGAAATGTCTCCTTCCATAGCTGAGCACCGTGCGCGAGTGGTGGAACATATAGAGATTGCCCACAGAATtgccagagagaatattcagCGTGCCCAACAACGCATGAAGGATTATCATGACAGGACGGCAGTACCACTCAAATACACACTCGGCGATAGAGTATGGGTCTACACCCCGAAGAATCGGAAAGGACTCTCCAAGAAGCTCGCGCACAATTACCACGGACCGTACCGCATTGTCAAATTTTTGTCGCCGGTCCATTGTATTCTGCGCGCCACGGATAATCGCCGTGTTTCCACGACAGTCCATATCTCTCGATTGAAGCCGTATGTAGACCCAGATTCCCGTCCTATTCGTCAGCCACCGGAAGATGTGGATGAACCTTTCCTTGCAGAGGACGACTTTCCGGACGATAGCTTTCTGCCAGATTTTACAAACAACATCCGCGGGCGAAACGTTTCGATGACGACCCTGATTACCACCCTCGAATGGCCGCTTTTGTTACAGCTGAGTTTCCAAACAACCACGCTATCGCTGCTTTCTCACACGAAATAA

Transcript

ENSJVNT00000016161

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9UR07	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1
P0CT41	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1
P0CT34	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000010 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17921 all species →	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF00665 all species →	rve	Integrase core domain	Domain	Interproscan
PF17917 all species →	RT_RNaseH	RNase H-like domain found in reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043128 all species →	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR041588 all species →	Domain	Integrase zinc-binding domain	Interproscan
IPR001584 all species →	Domain	Integrase, catalytic core	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR041373 all species →	Domain	Reverse transcriptase, RNase H-like domain	Interproscan
IPR050951 all species →	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984 all species →	PROTEIN CBG26694	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0015074 all species →	Biological Process	DNA integration	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07497	K07497; putative transposase	-	Replication and repair	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.