Gene detail

Detailed information of ENSJVNP00000016897.1 in Echinopora horrida

Genomic Location: not available for this species
NR annotation: XP_020617211.1, AP-4 complex subunit mu-like [Orbicella faveolata]
Species Echinopora horrida · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9SB50	AP-4 complex subunit mu OS=Arabidopsis thaliana OX=3702 GN=AP4M PE=2 SV=1
O00189	AP-4 complex subunit mu-1 OS=Homo sapiens OX=9606 GN=AP4M1 PE=1 SV=2
Q29RY8	AP-4 complex subunit mu-1 OS=Bos taurus OX=9913 GN=AP4M1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006002 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00928 all species →	Adap_comp_sub	Adaptor complexes medium subunit family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050431 all species →	Family	Adaptor complexes medium subunit	Interproscan
IPR036168 all species →	Homologous_superfamily	AP-2 complex subunit mu, C-terminal superfamily	Interproscan
IPR001392 all species →	Family	Clathrin adaptor, mu subunit	Interproscan
IPR028565 all species →	Domain	Mu homology domain	Interproscan
IPR011012 all species →	Homologous_superfamily	Longin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10529 all species →	AP COMPLEX SUBUNIT MU	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005802 all species →	Cellular Component	trans-Golgi network	Interproscan
GO:0006605 all species →	Biological Process	protein targeting	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0031410 all species →	Cellular Component	cytoplasmic vesicle	Interproscan
GO:0090160 all species →	Biological Process	Golgi to lysosome transport	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0030131 all species →	Cellular Component	clathrin adaptor complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSJVNP00000016897.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.