Gene detail

Detailed information of ENSJVNP00000018787.1 in Echinopora horrida

Genomic Location: not available for this species
NR annotation: RMX49531.1, hypothetical protein pdam_00017434, partial [Pocillopora damicornis]
Species Echinopora horrida · all data for this species · gene families

Sequence

CDS

ENSJVNT00000018926

ATGAGTTCCTACAGCCACACACTGGTGAGAAAAACTGCAGTCGCGCAAGTCAACGCGACAAGTGCCTCATCTACTATCCCTCGTCTTGCTGAATCTATGCTTTACACATCAGAGGAGCTCAAAACCGGTTCTCCATCAATTTACAAGCTGTGTATGAGAGAGGAGATGAGGCGCACAGAAGGCATGATTGCAAGACAAAGCATAGGTAAGCCTTGCCGAATCGGGCGTGGAGAAACCGAGAAGGTGTTTATGGTGGTAGGAGCAACAGGAGCTGGTAAGACGACCTTAATCAATGGAATGGTTAACTACATCCTGGGAGTGCAATGGAAAGATGAGTTCCGATTTCAGGTCATAACAGAAGAAACAAAAGCTACCCAAGCTCACAGCCAGACTCAGGATATCACAGCATATACGTTTCATCCCATGAAAGGTTCAGCCGTGCCTTACACATTCACCATTATCGACACTCCCGGGTTTGGAGGGACGGAAGGATTAAGAAGAGATAAGAAGATCACCGAACAGATAAAGGAGTTCTTTTCCATTCCCCCGCCAGATGGCATCGATCACCTCGATGGCATCGGTTTTGTTGTCCAGGCCTCTCAGGCTCGTCTCACCTCAACGCAGGAGTACATATTTGATTCTATCCTCTCGATTTTTGGAAATGACGTCtccaaaaacattttcatgaTGATCACCTTCGCAGATGGCCAACGCCCTCCTGTTTTGGCGGCAATCAACGAAGCCAAGATTCCAAGCCAAGGTGAAAAGTTCTGTAAGTTCAACAACTCAGCTCTTTTCGCTGAAAATGAAGAATCCGAGATGAGCTTTGACGAAATGTTTTGGAAGATGGGCTTTCATtcttttcagcatttttttgaAGAATTTCCAAAAGCAGAGCCAGTCAGACTGAACATGAGTGAGGATAAAGTCCTCGAGGTGCCTTGTTTTGGGCAATCATTTCAGTTGGGGATGCTCTATGATTGTCGCAGTCATCACCTGGTTTCAGGACCAACGTTGTGGGAATCTGACATTGTTAAGAATGCATCCGTGTCTCGTGCTTCTCCACAATCCAGGTATGAAGTTTTTACAAGTCACAGCTTGGAAGAGAAAATGGCCCTGTTAGGCGTCGATTCTAGCCTAAAACCGAGTTTGATGACCGGGTTGGTCAAGCCATCTGGTACTGGAAACTTCATCTTCGACCAAAAGTTTTCCAAAAAGCAGGCTCGCGTTACTCTCAAGTACGAGAGCACGTCGAAATTTGATGCACTTAGCTTGGATCAGGTGAAGAAAGAAGTGCATAGAGACGTTAGCGAAGAGATGACAGCCACGCACTTTGTATCGAGGATTGAATATGGCGCACAAGCAGTTTTCGTCTTCGAACGTGATGTCGacgagaaagaaagaaatgccGATGTTGAAAATGATCTGAAATTCACTATCGACTCCTTACCTCGCGTTGCTGCCGACGGAAACGCCTCTTTTTGTCCAGATGAGAAGGATGTGGAagaactgaaaaaaatcaagtGCACGTTTTATGGAAACCAGACCATGGCAGGTTCCAAGAGTCCCATGGGTTATCAAGATGCAGTTATCGCCTACAGTGCTCTCAATACCAATGAAGACCCCCAAGCAGGAGAAATTCCCAAGAAGGTTTGGCTTCACCCGCTGGGCTCACTGGACTCGACTATTGTTCGGCCTGTGCTGGAGATTAGTTCTCAGGTGACTGATGGATTACAGGATATCATGACAATGTGCTCTATCTTCTCCAGCCTAAAAAGGCATATCAACAGATGTGGAAAAGCGTTGTCGGAGTACAGAAAGAACTTACTCAAGACGCTATCAAGCATGTTGCCGGTGGTGAGAAGTGGTGATGAAACAGAAACGATCCTTACCGATGTCCTTGGCAAAGTTGCCTCATCTCCTTTTCACCAGACCTACCTCTCTTCTTGGATCAGTGGAAAAGAGAAAGAGGTGAAGCTATTGTCCACTTACTTGGAATACCTAAAAGATGTTCAGCTGGTATTGTCACTAGAAGACCTCGATAGTGTGGTCGACTCCTTAGAGTATGATCAAGTTGTTTGCTTTTCCCTGCTGCCAGTTAGTGATCAAGACGACATTGCTGAACAGATGTACGTCTTCTTACGAAGTGGAAGTTGGGAGCCGGGACGTCTTGCTACAAAACGGTGGTTTGAAAATCCTGAAATCATTAACGACATCAAGTCGAAAGCAAGAATTTTCAGAGGCTTTGCGAATGAAAATGGGCGCGACGAGAACACCAAGTTCATCTTCACCAACATTCACAGGATTACGGACGAGAAAGTTGTTACGATTCATCTGTATGAAGATGGTCATGCCACCGAGTTGGAGCCTCCTGGTAAACCGGAAAAGCCTTATGCAAAAAAGAAGAGTGACTCAAGCATTACTCTTGAATGGAAGGAATCACCAACCGGAGTGAGCTCAGTCCAAAAGTACACTGCGCACTTTCGACTTGCTGTCAGCGACTCAAATGGAGAATCCGGCGGAGAATGGACATCTTCGCAGACAGAGGGACCAGAGAATGTTATCACAGTGGATGGACTGGAAGCGAAAACGGCATACGTGTTTAAAGTGAACAGCGTGAGTAAGGCTGGCAGAAGTGTTATGAGTGACATCAGTGACCGCATTGTTACCAAAGAACCTGTCGCTCTTCCTCAGACTGGGGGCTCTTCGACTGAATCAGATCCTCTCCAGGATGAAGAACAAGACTACGCTCCTTATTTCGAGAGTAATGGTGACGGTGTATGTCACAACACCACTTTGACATCAACTTCCACCTCTTCAAATGATGTTAAAAGCCCTGTTATTAACAAGGATATAGACCCAAGAAACGAGCTGCACAAGCAGCACACTGCCGAAAGGAATGGTCCACACAAACATTATAAAGCATTAAATAGCAATGGCACAGCATTTTTCGTTCCCTATCGTTTAGCTGATTTTATGGTCTCTTCCTCCAAGAAGATCGCAACTGAGTCTCCATCAGTCTACAAACTTCCCGCGAGAGTTATCATGAGACGAGAGAACAGCATGATTGCAAGACAAACCATCGGTAGGCCAAGACGAATCGCAGGACTGCTCCCTGAGAAGGTCCTTATGGTTGTAGGGGTAACAGGAGCCGGAAAAACGACTCTGATCAATGGCATGGTGAACTACACATTGGTTGTACAGCGGAAGGACCACTTCCGATTTAAGCTCATCAATTCTTTTTCATACCATATAAATGGTATCGATCACCTCGATGGCATTGGTTTCGTAACTCAAGCGTCCCTGGCGCGCCTTACTCCACCACAAGAGTACATCTTTGATTCAGTTTTGTCTATATTTGGAAACGATGTTTCCAAAAACATTTTTCTGATGCTCACTTTTGCCGATGGCCAGCACCCCCCTGTACTGGACGCCATTAGGAAAGCAAATATTCCATGCGAGAGGTATTTCAAATTCAACAACTCAGCTCTCTTTGCGAAAAATGAGGAAAATGAAGAAAGTTTTGATGCAATGTTTTGGAAGATGGGCTTTCGTTCGTTCCAAAGGTTCTTTACTGACTTTGCCAAATCGGAAAGCGTAAGTCTTCGACTCACCAAGGAGGTGTTGAAAGAACGTGAGCAGTTGCAAACCCTCCTTGAAGGCCTGAACCCGCAAATAACTATGGGTCTCAACAAGATTGAAGAGATGCGACAAGAAGAGCTCATTCTGCAACACCACGAAACGGAGATCGAGACTAACAAGAAGTTCACATATACAGTGGACATTCCCAAACGACATCAGATTGACCTTAAAGGTACTGGAAGGCACACAACGACTTGTCTTCGCTGCAACTTCACGTGCCACAAAGACTGTGCGTATGCAAATGACAACGATAAACGCAACTGCTGCGCTATGGGCCCAGATGGCAACTGTACAGTCTGCACGATGCATTGCCTCTGGTCAGAGCACAGGAATCTTCCTTACCTGATTAAGTACGAGACTGTGACTGAGACGAGAACGTCAGATGACCTGAAGAAAAAGTATGAAAAAGCTATCTCGGGCAAATCTAGAGTGGAAGGCATGATTGTCCAACTTGAGGAGTTTCTTCAAGGTGTGCACTCACGCGTTATGGGTATGATTTACCAAGCCCAACAAAGTCTTTTCCGCCTTGATAAAATTGCTCTGAAACCCAACCCACTGACAGAGGTGCAATACCTGGATCTACTTATTGAGTCAGAGAAGAACGAGGCCAAACCTGGTTGGAAGCAGAGGGTAGAATATTATGAAGAGGCCAGGCGCCAAGCTGAGATTTTGTCCAAAGTCAAAGATGTCAAGGCAGCTCAAAAGGAGATTCAAGAGAAAGCTCGCAAAGGAGACAGATGGTATCACAGATTCAAGTTCTGGTGA

Transcript

ENSJVNT00000018926

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000993 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18078 all species →	Thioredoxin_11	Thioredoxin-like SNTX domain	Domain	Interproscan
PF21109 all species →	Stonustoxin_helical	Stonustoxin helical domain	Domain	Interproscan
PF00735 all species →	Septin	Septin	Domain	Interproscan
PF00041 all species →	fn3	Fibronectin type III domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040581 all species →	Domain	SNTX, thioredoxin-like domain	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR048997 all species →	Domain	Stonustoxin-like, helical domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR030379 all species →	Domain	Septin-type guanine nucleotide-binding (G) domain	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32046 all species →	G DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12818	DHX8, PRP22; ATP-dependent RNA helicase DHX8/PRP22	EC:5.6.2.6	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.