Gene detail

Detailed information of ENSJVNP00000030615.1 in Echinopora horrida

Genomic Location: not available for this species
NR annotation: PFX17668.1, Kelch-like protein 20 [Stylophora pistillata]
Species Echinopora horrida · all data for this species · gene families

Sequence

CDS

ENSJVNT00000030843

ATGCTGGATGGAAATGATAAGCTAGCAAAGGCGATTATTTCAGGAGACAAAACAAACACTGGTTATGTCTTCGAGGCTTTACTTCCCACCAAGGAGTTATACGACAGCGCGACCAAGGTTCTCGTAGCGGAAACATTggtcaaaataaaaatccaagAAGTCAAAGTAATGGTTTTAGCTTGCCGGGAGCGGTCGGTGAAGACAGTGTTAGAAGTTGCGAGGGACCTGGAGATGGTTTCTGAGCATTTCCTCTGGATTGGAACGGAGACTGTTGTTCGCGCCACAAGTAACACTTCTGTGGGGATAActgtttcaaactttattggAATCGAATTTAATACGTCAGAGGAAACGATAGCAATGAACGCACTGCAGATTCTTTCTTCTTCAGTGAAAGCTGATTCTGTTGACTCAGTGATTACTGTTTCACCTTCAACAAACGAGTCTTGTTTTGATGATCAGTTTCGATGGATTTCGCGTAAAATGTTTGCAAGTCCTCTCGGGAACACAAATGCAAGTCCTTCCCTTGACAAGAAACTTCTTAGCGATGCCTACACTATTTTAAAGCATGAAAACAATTCTGTGAAAGCGCGATCCTGGATGAAAATCGGAACATATCGATACAAGGAAAGTATTCAAATAGAAAGCAGCATTCTTCGACAACTCAGCCGCATTCCTCACAGGGACGCAAAGGCTCTTAGAATTGTTACCATAGTGCATGGTCAGTACCTTTACAAGGTTGGTGGGGTGCTAGGCTGCGAAGGCGGAGAGCTTTGTACAAAGCAAAGCTTGCAACGAAGATCACTTCAACCGAGTTGCGAAATAGGTGTGCCTTGTTATGAGCATGCGCACTCAACGAACGACACGAACCGAAACGACACGGAACAGTTGCATATTTTCTGTGTATCCGGTTTAATGGTGGACCTTCTGGGCTTGATAAAGAACAAGCTCGCCTTCAGTTACGAGCTCTATCTTGTGCCAGATGGAAAGTATGGCGCCATAGATGATGCCACGGGTCGTTGGAATGGAATGATAGGAGAGGTGTTGTACGGATACGCCGACATGGCACTTGGCTCCATCACCATCAACGCGCAACGCAGCCAGGTTGTAGATTTCACTTCTCCTTACGGCGAGGTTGGGATAGGAATGGTGACAGCGAACGGAAATTCTGCCAGACCTTTGATAACCATGGAATTTCTCGAACCGTTTGGCTCAAGCTTGTGGCTTACTATTGTGACAACAATTCTTACAATGCTCGTTGCGCTGTGGTTCCTGGACCGCAAAACAAGGGAGTTTTATTGTACGAGCTTGGAAAGAGAAAAGAAGTACTTTAAAAGGAGACAAAGAGTGACACTGCTTGAAAGCATGTCTTACACGTGGAGCACGTTTGTGCACGTGCCGGCTGGAAGTGGTTGTCCAAGAAGCTTAAGCTCTCGGTTTGTCGCTATTTTCTTCGCGTTCGCCATGATCATCCTCAGTAGCACTTACACGGCTAATCTTGCTGCCAACAAGGTGAAAGATGAGGCAGAACCCCCCATAACAGGGATACATGATGAAAAGATGTTAAACCCTCCCCCAGGCTTTCGCTTCGGAACTCTAAAGTCGAGCAGCACTGAGGCCTACTTCAAGTTTAATCGTGACCCGCGCATGCGTAAGATCTATCAGAACATGAAAGACCATAACGTGGAAAATGTGCATGATGGTGTCAAGAAAGTTAAATCAGGGGAAATTTCAGTCTACATAGACGACCAACCTTACCTAGAACACATGGTCTCTTCGCAGCACAACTGTTCCCTAAGAATTGTGGGAGAGCCGTTTGGCATCTCTGGTTACGGACTGGTCCTTAGGAAACAATCCTCTTGGACCCAGCCCCTCTCGAACAGTATTCAACAATTTAGCGACAACAACGTGTTGGCAGACCTATGGAGCAAATGGCTGGTACGAAAATGCTTGAAAAAGGAAGATTTTGAGAAAACGCCTGACAGATTGTCCGTACATAACTTCAACGGCGTTTTCATTCTTGTCGCTGCTGGAATTGTTGTCTCGATTCTATTCTTAGGCTTTGAACGTATGGTGGCTTCTTATCGAGCAAAAAGAAGTGCTCAAAAATTTGAAATGAGAAACGGCAGTCATGAAACGTTCGCTGATTACTTTAAAAGCTCGGCGATTGACTTCGGTTTCTTGGGTAGTAGCCCTTTGAAGTCCACTCCTCAACTGAACAAACCGAGGATGAGGCATATCTCGGATCGCCACCCTAAGCAACTCCTCGACACTTTGGAAACTTTACGACAGTGCAAAGAACTGTGTGATGTTGTTATAAAGGCTGGGAGCAAAACTATGTTTGCACATCGGGTGATTTTGGCGGCGTGTAGCCCATATTTTCGGGCCATGTTCACCGGAGAGATGGCAGAGAGCAGGCAAATGGAAATCACAATCCAAGATGTCGATGAAACAGCGATGGAATTGCTGGTTGATTTCGCGTACACGGCTTCGATTACTGTGGAAGAGGGCAATGTTCAAGTGCTTCTCCCTGCCGCTTGTCTTCTTCAGATCTCAGAAATTCAGGAAATATGCTGCGAATTTCTAAAACGCCAACTAGACCCTTCGAACTGTCTTGGTATTAGGGCCTTCGCTGATACTCACGCCTGTCGGGATCTATTACGTATCGCCGACAATTTCACTCAACACAATTTCCAAGAAGTGATGGAAAGTGAAGAATTCTTGCTTCTACCAGTGACACAGTTACTCGACATTCTTTCAAGCGACGAGCTCAACATTCGCTCAGAGGAGCAGGTCTTCACTGCGGTTATAAACTGGGTCAAATACAGCGTTTCAGAGAGGCGATGCCATCTTTCGCAAATTTTACAACACGTCCGTCTACCGCTGTTATTGCCCAAATTCTTAGTTGGGGTCGTTGGCACTGATCCTCTGGTGAAAAGTGATGAATCGTGTAGGGATTTAGTTGATGAAGCAAAGAATTACCTTTTACTTCCGGAGCAAAGGTTGCTCATGCAGGGGCCACGAACCCGACCACGAAAACCAACGAAATGTACAGAGGTACTGTTTGCAGTGGGTGGGTGGTGTAGTGGGGATGCCATCAGTAGTGTTGAACGCTATGAGCCACAGACAAGTGATTGGAAAATGGTCGCCACTATGAGCAAGCGACGCTGTGGCGTTGGTGTTGCAGTTTTGGATAATTTATTGTATGCTGTTGGGGGTCATGATGGTAGTAGTTACCTCAACAGTGTTGAGAGGTATGACCCCAAGACAAACCAGTGGAGCAGTGACGTTTCACCCACTTGCACTTGCCGGACCAGTGTTGGTGTTGCTGTTCTTGATGGGTACATGTATGCTGTTGGAGGTCAAGATGGTGTTTCATGTCTGTACATTGTCGAAAAGTATGACCCTCAGGAAAACAGATGGTTCCGAGTGGCATCTATGAGTTCTCGTCGACTGGGTGTGGGTGTTGCAGTGCTTGATGGATATCTTTATGCCATTGGTGGTTCAGATGGTACTTCACCTTTGAACACAGTAGAGAAATATGATCCTAAAACAAACCGGTGGAGTCCAGTAGCTCCCATGGGAACACGAAGAAAGCATCTTGGAGCGGCTTTGTTCCAAGATAAACTCTATGTTGTTGGAGGAAGAGATGATGCAACAGAACTAAGCAGTGCTGAATGCTATGATCCCAAAACAAACCAGTGGTTTCCAGTAGTTGCAATGAACTCTCGCCGCAGTGGAGTGGGACTGGCAGTAGTGAATGGCCAGCTTCTTGCTGTTGGTGGTTTCGATGGCAATACCTATCTTAAGACTATTGAAGTGTTTGATCCAGTGTCTAACCAGTGGAAGCTTTACGGAGGAATGAACTATCGCAGACTTGGCGGTGGAGTAGGAGTCGCCCTTGTAATTCCTGAGAAGTTTCAACACATTTTGCGTGTACTGAACACCAACATCGATGGAAAACAAAAGATCATGTTTGCACTGACCTCCATTAAGGGAGTGGGGCGAAGGTATGCCAACCTTGTGTGTAAGAAGGCTGATGTTGATATGAATAAACGTGCTGGAGAACTCACTGACGATGAGGTGGAGCGAGTTATTACTATTATGCAAAACCCTCGTCAGTACAAAATCCCTGACTGGTTTCTGAACAGGCAGAAGGATATCAAGGATGGCAAGTATTCACAGATTCTTGCCAACAATCTTGAGAGCAAGTTACGTGAAGACCTTGAAAGGTTGAAGAAGATTCGTGCTCATCGTGGTCTTCGTCACTACTGGGGTCTCCGTGTTCGTGGTCAGCACACCAAGACAACTGGTCGCAAGGGAAGAACTGTTGGTGTTGCCAAGAAGAAGAACTAA

Transcript

ENSJVNT00000030843

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8VCK5	Kelch-like protein 20 OS=Mus musculus OX=10090 GN=Klhl20 PE=2 SV=2
Q08DK3	Kelch-like protein 20 OS=Bos taurus OX=9913 GN=KLHL20 PE=2 SV=3
Q9Y2M5	Kelch-like protein 20 OS=Homo sapiens OX=9606 GN=KLHL20 PE=1 SV=4

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006777 (this species only)
Transcription factor family	ZBTB · all TF in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|BTB · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00060 all species →	Lig_chan	Ligand-gated ion channel	Family	Interproscan
PF07707 all species →	BACK	BTB And C-terminal Kelch	Domain	Interproscan
PF00651 all species →	BTB	BTB/POZ domain	Domain	Interproscan
PF00416 all species →	Ribosomal_S13	Ribosomal protein S13/S18	Family	Interproscan
PF00497 all species →	SBP_bac_3	Bacterial extracellular solute-binding proteins, family 3	Domain	Interproscan
PF01344 all species →	Kelch_1	Kelch motif	Repeat	Interproscan
PF10613 all species →	Lig_chan-Glu_bd	Ligated ion channel L-glutamate- and glycine-binding site	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001320 all species →	Domain	Ionotropic glutamate receptor, C-terminal	Interproscan
IPR015915 all species →	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR010979 all species →	Homologous_superfamily	Small ribosomal subunit protein uS13-like, H2TH	Interproscan
IPR000210 all species →	Domain	BTB/POZ domain	Interproscan
IPR011333 all species →	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR001508 all species →	Family	Ionotropic glutamate receptor, metazoa	Interproscan
IPR027437 all species →	Homologous_superfamily	Small ribosomal subunit protein uS13, C-terminal	Interproscan
IPR011705 all species →	Domain	BTB/Kelch-associated	Interproscan
IPR006652 all species →	Repeat	Kelch repeat type 1	Interproscan
IPR001892 all species →	Family	Small ribosomal subunit protein uS13	Interproscan
IPR001638 all species →	Domain	Solute-binding protein family 3/N-terminal domain of MltF	Interproscan
IPR018269 all species →	Conserved_site	Small ribosomal subunit protein uS13, conserved site	Interproscan
IPR019594 all species →	Domain	Ionotropic glutamate receptor, L-glutamate and glycine-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24412 all species →	KELCH PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0015276 all species →	Molecular Function	ligand-gated monoatomic ion channel activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0005216 all species →	Molecular Function	monoatomic ion channel activity	Interproscan
GO:0006811 all species →	Biological Process	monoatomic ion transport	Interproscan
GO:0038023 all species →	Molecular Function	signaling receptor activity	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSJVNP00000030615.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.