Detailed information of ENSJVNP00000042617.1 in Echinopora horrida

Genomic Location: not available for this species
NR annotation: XP_015750265.1, PREDICTED: threonylcarbamoyladenosine tRNA methylthiotransferase-like, partial [Acropora digitifera]
Species abbreviation EHORR · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q91WE6Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Mus musculus OX=10090 GN=Cdkal1 PE=1 SV=1
Q5VV42Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Homo sapiens OX=9606 GN=CDKAL1 PE=1 SV=1
Q6P4Y0Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Xenopus tropicalis OX=8364 GN=cdkal1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005716 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04055
all species →		Radical_SAMRadical SAM superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020612
all species →		Conserved_siteMethylthiotransferase, conserved siteInterproscan
IPR023404
all species →		Homologous_superfamilyRadical SAM, alpha/beta horseshoeInterproscan
IPR006638
all species →		DomainElp3/MiaA/NifB-like, radical SAM core domainInterproscan
IPR007197
all species →		DomainRadical SAMInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11918
all species →		RADICAL SAM PROTEINSInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0051539
all species →		Molecular Function4 iron, 4 sulfur cluster bindingInterproscan
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0051536
all species →		Molecular Functioniron-sulfur cluster bindingInterproscan
GO:0005783
all species →		Cellular Componentendoplasmic reticulumInterproscan
GO:0035598
all species →		Molecular FunctionN6-threonylcarbomyladenosine methylthiotransferase activityInterproscan
GO:0035600
all species →		Biological ProcesstRNA methylthiolationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSJVNP00000042617.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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