Gene detail

Detailed information of ENSJVNP00000043989.1 in Echinopora horrida

Genomic Location: not available for this species
NR annotation: KAJ7361772.1, DNA-directed RNA polymerase III subunit RPC10 [Desmophyllum pertusum]
Species Echinopora horrida · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Y2Y1	DNA-directed RNA polymerase III subunit RPC10 OS=Homo sapiens OX=9606 GN=POLR3K PE=1 SV=3
Q9CQZ7	DNA-directed RNA polymerase III subunit RPC10 OS=Mus musculus OX=10090 GN=Polr3k PE=3 SV=1
Q2M2S7	DNA-directed RNA polymerase III subunit RPC10 OS=Bos taurus OX=9913 GN=POLR3K PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009466 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02150 all species →	RNA_POL_M_15KD	RNA polymerases M/15 Kd subunit	Domain	Interproscan
PF01096 all species →	TFIIS_C	Transcription factor S-II (TFIIS)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001222 all species →	Domain	Zinc finger, TFIIS-type	Interproscan
IPR034014 all species →	Domain	Pol III subunit C11, C-terminal zinc ribbon	Interproscan
IPR012164 all species →	Family	DNA-directed RNA polymerase subunit/transcription factor S	Interproscan
IPR001529 all species →	Domain	DNA-directed RNA polymerase, M/15kDa subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11239 all species →	DNA-DIRECTED RNA POLYMERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0006351 all species →	Biological Process	DNA-templated transcription	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0001056 all species →	Molecular Function	RNA polymerase III activity	Interproscan
GO:0003899 all species →	Molecular Function	DNA-directed 5'-3' RNA polymerase activity	Interproscan
GO:0005666 all species →	Cellular Component	RNA polymerase III complex	Interproscan
GO:0006386 all species →	Biological Process	termination of RNA polymerase III transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSJVNP00000043989.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.