Gene detail

Detailed information of ENSPYFP00000001296.1 in Pteroeides griseum

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Pteroeides griseum · all data for this species · gene families

Sequence

CDS

Transcript

ENSPYFT00000001405

CGTTTAGCAGCGGTAAAAAACGAAGTGCTGTGGAAGGCAATTTACATGTCAACGGTTTCAACTAAACAGAAATCCAAGCTGTTGTTCTCTTGGGGAGCAAACAGTTATGGTCAATTATGTAATGGCAACAAGGACGATGTCTCTGTCCCACACCCTACTGAAAGCACTTGCACTGCGTTTATTAAATACATAACGGGAGGAGGAGGCCACACAGCGATCATAACTGACGATGGTGATTTACACACAGCAGGATGGAACAACAAAGGACAATTAGGAATTGTCTCCCACATCAGCGAGATAGCTCAACTCACACATGTGCCACATGTTTTAAAGGTCCAATCTGTGGCGTGTGGGTGGAACCACACTCTTATCATCAATAATCACGGTCAGCTATATGGATTTGGATCAAATCAATATGGACAAATTGGCCTTGGAGAAGATATTAGGAAAACTAACAGTGCATACCTTGTGTTGATCCCAAAAGAAAAAAATGTCGTTTCAATTGCAGCAGGACTCAGACACAGCGTGGCCGTAACAGATTCTGGTTGTGTGTGGACATTTGGTTCGAACAGACACGGTCAACTTGGCCATGACAACAATGACATCAAGTTAATTTATACTCCAAACCTAGTGAAGGCATTGGGGGATACCAAAATTGTACGTGTTGGTGCTGGCTCTAGTCATTCTCTCGGCGTTTCACaaAGAGGTGAAGTTTTCTGCTGGGGTTCAAATCGTCATGGTCAATGTGGGTTGAGCCCTAGTGATGAGCAAATCTGCCCGGTACCAAAGAAAGTTCGGGGAGTTTTACACGATATAAAAGTGTTGGAGATCTTCAGTGGATGGAGCCATATTTTAGCCAAAACTAATTTGGGTGAGGTGTTTTCCTGGGGGAGAGCTGATTATGGACAACTCGGCTTAGGAAGTGAAATTGCCCGTGAGGGTTTCTGTTCGTTTGGCCAAAAAATTTCGTGTTTGAGCGGAGCCATTCAGATTTGTTGTGGTTCAGAGCATAATGCTGCAATAAACAGTACTGGCGAAGCTTTGTTTTGGGGCTGGAATGAACACGGAAATTGTGGGATTAATGAGGGGACTAATGTCTTCGAACCGACTCCCATTAGAATTTTTGGAAAAATGAACGTAAATTTAATAGGATGTGGAGGAGGAACGACCTTTGCCGTCGGCTCAACTATCGCAACAAATAAGACCGACTAACAACTTCAACACTTGCTGGTATGAATTATCTGCTGTAGATAGATCATCGCCATTGCCGCTGAACCTAACACCGATTACTTATACTGTTGAAATCGATTACTTGCTAGAGTTACAATAAGCACGTATACATGTGACTTTACATACGCAGAAAAGATCAAGCAACTGCAGTTTGAACGGATCAAATGATAAGGaagtaaaagaaaagaaataacTCGTCATTTCTTCAAGATGCCGATTATGAGCCCAGTCTAAAATGGGTTTTTAAAGTATATATTTTGAATTAAAATttttctaatcatacattctGCGAAACTTTGTCTGTCACCTTCTTAGGTCTTTATCCATCATACTATAAACACCCACGCGATTTTTTTTGGTACTTGCTAAATCTTGTGAACAATATGGCCAGCGCAGGCATGTCACCCAAATTGTGtcaaatattttacttttttgatTATATCTTGACTTTTATGCAAAAGGAACTTTTGAGGATACGAAAGGTCTATGTACAATTACTGGCCTAACTGTTTATAACTTTTAACATAGCCATACATTAAGATCTATATTACTGGCTAACTGCATGTCTATATGACTTTTAATTTTATAGCCGTACGAAACATTAAGGTCAATGTACAAATTATTTGCTAACTGTTTTGCTAACGGATATTTTGCTTATAAACTGATTTTACTCGAAATAACATCGGTGACCCCAACTTTTTATTTCTGAAAAAGCTTTTGTGTTCTATAATAAATTCTGTAATGTCAAAATTTTTCGGCATTAGAGAACTTTTTTAAATTGGCGTAAAGGGTCGCTCTGGTACGCAGAAGTGATTTACGAAATAGAAAATGttggtcaccgaacttattttCGATTAAAGTCGTCTTGAAGGCAAAATATCCGCCATATTAAAACGCCACCGTTTCCATAACAACGGTCGTTACGAAatctattttgtattttttagatACGCCTAAGTTTGCATGTAAATTCACTTTACT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13540 all species →	RCC1_2	Regulator of chromosome condensation (RCC1) repeat	Repeat	Interproscan
PF00415 all species →	RCC1	Regulator of chromosome condensation (RCC1) repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000408 all species →	Repeat	Regulator of chromosome condensation, RCC1	Interproscan
IPR009091 all species →	Homologous_superfamily	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Interproscan
IPR051709 all species →	Family	Ubiquitin ligases and GTPase regulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45622 all species →	UBIQUITIN-PROTEIN LIGASE E3A-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0050709 all species →	Biological Process	negative regulation of protein secretion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15421	SERGEF; secretion-regulating guanine nucleotide exchange factor	-	Cell motility	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.