Gene detail

Detailed information of ENSPYFP00000001474.1 in Pteroeides griseum

Genomic Location: chr1:62932423...62967208
NR annotation: no NCBI-NR hit recorded
Species Pteroeides griseum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

ENSPYFT00000001601

CTTAGGTTTGCTCAGAACGCTTCTCGTGTTGTTTTCTGCCGTCGTTTCCGAAGTTTCTGTTTTATTTAATAACATTAGGAATTTCAGGCGAAATTTTTAGAATGAAGTTCCAAAAGGACCAGCTCGACCTTTTGAAAAGTTTTGTTGAAATCATGACGATTAATCCAGCAGAGATTCACAACCCTGAGTTGCAGTTTTTTAGAGATTGGCTGGAAAGCTTTGGGGCTAACTTGCCACCACCTGAATCTAGTGAATCAATTAAGAAAGATGAACCTGGGGATGTGCACATGGAAGAGGAAAAGAAGCCTCAACAAGAAGCAAAACCAAGTGACTCAGAAAGTGATGAAAGTCCTGAAAGTGATATAGACCTAGACAACGAAGGTGTCGTTGAGCCTGACACAGATGAACCACATGCTATGGGTGATCCTAATGCCGAGGTTTCAGAGGAGGCAATGACTGCAGCAAGCGAAAAACGGTCTGCTGGTGTTATGGCAATGTCAGAAGGTAAATTAGATGAAGCCATCTCGTTACTAACCGAAGCTGTGGTTGCTAATCCTTGTTCTGCGCCAACGTTCGCCAAAAGAGCTAGCTGTTACATCCGCATGAACAAACCAAATGCAGCAATCCGAGATTGCGATCGAGCTATTGAAATTAACCCTGATTCTGCCCATTCATACAAATGGCGTGGAAGAGCTCATATGTTGTTAGGACATTGGGAAGATGCGAAAAAAAACTTAGTAACAGCTTGTAAAATTGACTGGGATGATCAAGCAAACGACTGGTTAAAGGCAGTCACACCAAATGCCCTAAAACTGGAAGGACACCAAAGAAAGCAAGAACGGAAAAAAGAAGAAAGAGAAATCAAAGAAAGAAGGAAACGAGTGGAACGAGCTAAAAAGGAACGCGAACGACAACAACGCGAAGAAGAAGAAAGACGGAAAGCTGCAGGTTCTGGCTTCCCAGGCGCTGGCGGGTTTCCTGGCGCTGGCGGGTTTCCTGGCGCTGGCGGGTTTCCTGGTGCTGGCGGGTTTCCTGGTGCTGCGGGGGCTCCTCCTGGTGCTGGAGGGTTCCCAGGTGGTTCAggCGCTGCAGGTGGGATGCCTCCAAATATGGCTGATATCCTTCAAGATCCAGAAATAATGACATACATGCAGGATCCAGAAGTTATCACTGCATTACAAGATATCATGAGTGATCCTGGTAACTTCAGCAAATACCAAAATAACCCGAAAGTAACTGCAGTGTTTGAGAAGATAAATTCAAAAGCAGGACAACCAAAGTGAACATTCCATCAATGGGTTTCTCATTTATGTGTGCTGCATTGTAATATAGATGATTTACTACGATTCATTGGCTTTGTCGGTTTAGAAAAACTTAGGCCGAGTTAACCGCTTGTCTAACAAAACTTTAATAACAATGTTTTGAACGTGCTTTAGTGTTGTCTGTCGAGATTGTACTCGTCGCTCGTAACAAAATATAAATGTATGTTCGTACTTAAATATTGGAACTGTGATTTCACGTTTTGCTGCTGCTTAATTGGGGTATATcttgaatacttcaataaatattttaatcatTAAATGTCTTTTGATTTCATCACCATAATTGATCTAAACTTTGTCACAATATACATAACTTTTACAGAATTACAgttatataattaaatactatGATGACTATAAAACATTCCGAGCTATCCCTGCATGTGTCACATTCCATGGTACTGTATTCTCGCATGTGTCATTTGTGTTACAGTGttaagaaaattttcaattgtTGTTTTGCTTACGGAATTGAGCCGCGTTCAACTATTATTATAATCTATATCATCAGTATTAGCCATTCCGTCTGTTCATTTCCGTGCCTAGTTAAAACTCCTGGGAAGCTGGGTGACAGCAACTGGCAAACGCGTCACATACAGTATGTGTATTAGTAGATTGACTGGCTGTTTGTGACCCATTGCATTCCTTTGGACTGAAAATGTCATGGCGTTCCGTCGTTTATGGGTGTTTGA

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005914 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00515 all species →	TPR_1	Tetratricopeptide repeat	Repeat	Interproscan
PF17830 all species →	STI1-HOP_DP	STI1/HOP, DP domain	Domain	Interproscan
PF18253 all species →	HipN	Hsp70-interacting protein N N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR034649 all species →	Domain	Hsp70-interacting protein, N-terminal	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR041243 all species →	Domain	STI1/HOP, DP domain	Interproscan
IPR006636 all species →	Domain	Heat shock chaperonin-binding	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45883 all species →	HSC70-INTERACTING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0030544 all species →	Molecular Function	Hsp70 protein binding	Interproscan
GO:0051085 all species →	Biological Process	chaperone cofactor-dependent protein refolding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0046983 all species →	Molecular Function	protein dimerization activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09560	ST13; suppressor of tumorigenicity protein 13	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.