Detailed information of ENSPYFP00000027600.1 in Pteroeides griseum

Genomic Location: chr4:7027839...7047213
NR annotation: no NCBI-NR hit recorded
Species Pteroeides griseum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007423 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03826
all species →
OAROAR motifMotifInterproscan
PF00046
all species →
HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009057
all species →
Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR003654
all species →
DomainOAR domainInterproscan
IPR001356
all species →
DomainHomeobox domainInterproscan
IPR000047
all species →
Conserved_siteHelix-turn-helix motifInterproscan
IPR017970
all species →
Conserved_siteHomeobox, conserved siteInterproscan
IPR051895
all species →
FamilyOrthopedia HomeoboxInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46770
all species →
HOMEOBOX PROTEIN ORTHOPEDIAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0000981
all species →
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355
all species →
Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0030182
all species →
Biological Processneuron differentiationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSPYFP00000027600.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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