Gene detail

Detailed information of ENSPYFP00000029610.1 in Pteroeides griseum

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Pteroeides griseum · all data for this species · gene families

Sequence

CDS

ENSPYFT00000031375

ATGTCCGTAAGATTGGAACATGTAGGAAGGATTTGTAATGTTTTGGTTACTTCACAAACAACAGGACAAGATGTTATTGAATGTTTAAAACCTGATGATGACAAAACTTATTATTTAGTGGAAATATGGAAAGGATGTGAACGACCAATTAGCCATGaagaaaaacttaaaaatgtCTTAGTCCAATGGGGCAGTGATTTAGATGATGTTAGTTTTATGTTGAAAGAGAAGTTATCAAGAAAGAACCATTCCCAGCACCGATCTCCTCATAATTCTCCCGTGCCATTCCAAGACCACCTTCATGAGCAAGAAATGAAAGTTGAAAGCATGGAAAAAGAACTTAAAGAGAAGGAAAGATATCTTCATTCGTTGCGTGCAAAAGACGCGGCAAAAAATGGTCTTAAAAGTAATTATGTACGACGTCTTGAGCTTAAAGTTCTGGAACAAGAAGAACAATTGAAACGTTTACAAACTattgaaaaagaaatatttaaatatcaaattgAAAATGAAAAACTTGTTCTTGAACTCCAACGTGTCCGTTCAATGTTTGCCTTCAAACACCAACAATTGGCCGAAGCAAGTGCACGTATTGAGTTACTTACGAGAGAACTTTCAGTTAAACGTCGAGAAAAGATGCTTGATAAAGATCTTGCGATGCCATTACAAGATGAAAACCAGCAACCTGTTATCCCTGTTCATCAACCTGTTAAACCTGTTTATCAACGTGTATCGAATCATCAGGCTGTACCTAGTCACCAGGCTCCTTTGACCGAAAAAGAAATTTTACGACTAACAGACAGTATGATACACAACAGACAACGTGTCGACCCAAAAAAACATACATCTGGGAAAAATGGCGGCTTTTTGTCGAAACATGCGCAGTTGGTAAAAAACGACGATGAGAACAGTTTGTTGTCATGGCGAGATGAGGAAGAGAACGATACTGAGACGAGCGCGGACTCTGGTCATGTGTCGGTGGACTCGCCCTCATATCAAACTGTGGGAATGGGACCGAGTTTCTATTTTAATGGTAACCCACCTGGTTTGTGTACGAGAAATGTTGAACGTTTTGATATAGACAAAGAATTTGCTTCTCAAATTGAGAAACGAAACACTGAAATGGACCTAAATGAACGAGATATGCCGCAAAAGATAACAAATCCTACTTATTCACAACATTCGCTACCTCGAACTAAACAACGTAAAACTTCTCTTGAAGCGGATTACAAAAAGTCACTTTTTATTCAAACCGAAAAAGAGCGAACTTCAATGAATTTATCAGATGTAAAAACACAAACCAAACTCGACTCGCCCCAATCCACGTCTTCGCTCTCCTCTCAGTCGTCGCAGTTGTCAGAGGTGCGCGGTGGAGCTATGTCGTCAAGTAATCAGGATAGAACAATTTCCCGGCCGTCTAAAGATCCCAGGAATGAGACCCTCGGGATAAAAGGGACCCGAAGTAAACCTGAAACAAAGAGCAATCCCGATCGCTCGGCTGGCTCTATTTCACATTTTCAACGAAGACATAGTGATTGTGAGTCTCCCACGCTAAAAGATCCCTCCAGTCCCCAACCAAATGACAACAGGGTAAAAACTCCCGTACCCGATAATACATCCGCGCAAAGACCCCCGGTTGTAAAACGCACGGATTCTAATTCCCCGGTACCTAACCAACGCTTAGTCTCCCGGGAAAATGCACCAAAACCGGGGGTTGATAGTAAACTTGAAAAAAGATCGATACCGGTAGGGCAACCTGTGCCGTCTGTGGGCGTTCAAGACATACTGAACGAAATCCCTGCTTTGAAAGTATCTGGTAGAGACACGAAGGCATTTCAAATTCAGACCATCGCTGAGAAAGACTCAGCTGAAACCAGCAGTAAAACACGTCTAATTGAAAAACCTGAAAACAAAGGTGGTCAGCCCGCAGGTAAAGATGCCAAAACGCCCGAAAGGGCGAATACGTCACGCAAATTAGCTCCCAAGCCTTTACCAAGAAAACGCACGAAAACGCCGCCCGTTCGGAACACCGATGCAACAGGTAATCTCGTGATGACGTTAGTGACGACGACGAGTCGACCACTGACTCCTACTACCGAGGACTCGACAATCATTCCAGAAAACCCGCGTCACCAAGGAAAAGAAAATAACCCCGTTTCTGAGAAGGTTGGAAATGGTGGTGGTCAGCAAAGTACTGGGACGAATAAGAAAGGCGCGGTTAAACCTGGAACTAGTGTTGGGGAATCTAATTTGAGGGGGAATTCtgggaaaaataaaaaaagtgggAAAAGAGTTAGTTTGGATCCTCATGCTGTATTACTTCATGCTTCGTTAGATGGAGAATTAGATGTTGTTAAATCTATTATTTATCAGGTTGAGGATCCAAGCTTTCCGAACACAGAAGGTCTAACAGCATTACATCATGCTGTATGTAACAATCATGACGATATTGTAAAGTTTCTAGTCGAGTATGGTTGTGATATTAATGCTGCTGATATGCAAGGATGGACATCTTTACATTGTGCTGCGGCCAATAACCGCGCTGATGTCTGTAAGTACTTAGTAAGACACGGCGCATGCGTGTTTTCTGTTACCGCCATTGAAGGCAAGACGCCATCACTTTGTTGTGAGAAAGACTCTGAAAATTTCCACGAATGTTTCTTGTATTTATCAGATTTAGAAAATAATGTTGGTATTATGAATGATGGCGTCGTCTACTCTGTTTATGCTTATCAAGCAACACGCAAAGATGAACTGAGCTTTGAATGCGGTGAGCGCATGACCGTTGTGCGCCGTGGTGACGTCACCGAAAAGGAATGGTGGTGGGCACGTGACTCAAGGGGTCAGTTCGGTTACATTCCACGAAATCTTCTTGGGctTTCTCCTCGTATCGCTCCTGATGTTTAA

Transcript

ENSPYFT00000031375

Protein

Gene family

Family type	Membership / link
Ubiquitin family	UBD\|Other\|SH3 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21712 all species →	ASPP1-2_RA	Apoptosis-stimulating of p53 protein 1/2, RA domain	Domain	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF00018 all species →	SH3_1	SH3 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR048945 all species →	Domain	Ras association domain-containing protein 8/10, RA domain	Interproscan
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR047163 all species →	Family	Apoptosis-stimulating of p53 protein 1/2	Interproscan
IPR000159 all species →	Domain	Ras-associating domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24131 all species →	APOPTOSIS-STIMULATING OF P53 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0002039 all species →	Molecular Function	p53 binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0042981 all species →	Biological Process	regulation of apoptotic process	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17554	PPP1R13B, ASPP1; apoptosis-stimulating of p53 protein 1	-	Protein phosphatases and associated proteins	ko01009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.