Gene detail

Detailed information of ENSPYFP00000031893.1 in Pteroeides griseum

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Pteroeides griseum · all data for this species · gene families

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00900 all species →	Ribosomal_S4e	Ribosomal family S4e	Family	Interproscan
PF00157 all species →	Pou	Pou domain - N-terminal to homeobox domain	Domain	Interproscan
PF00046 all species →	Homeodomain	Homeodomain	Domain	Interproscan
PF16121 all species →	40S_S4_C	40S ribosomal protein S4 C-terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038237 all species →	Homologous_superfamily	Small ribosomal subunit protein eS4, central domain superfamily	Interproscan
IPR017970 all species →	Conserved_site	Homeobox, conserved site	Interproscan
IPR013845 all species →	Domain	Small ribosomal subunit protein eS4, central region	Interproscan
IPR000327 all species →	Domain	POU-specific domain	Interproscan
IPR000876 all species →	Family	Small ribosomal subunit protein eS4	Interproscan
IPR002942 all species →	Domain	RNA-binding S4 domain	Interproscan
IPR041982 all species →	Domain	Small ribosomal subunit protein eS4, KOW domain	Interproscan
IPR036986 all species →	Homologous_superfamily	RNA-binding S4 domain superfamily	Interproscan
IPR001356 all species →	Domain	Homeobox domain	Interproscan
IPR014722 all species →	Homologous_superfamily	Large ribosomal subunit protein uL2, domain 2	Interproscan
IPR010982 all species →	Homologous_superfamily	Lambda repressor-like, DNA-binding domain superfamily	Interproscan
IPR013847 all species →	Domain	POU domain	Interproscan
IPR032277 all species →	Domain	Small ribosomal subunit protein eS4, C-terminal domain	Interproscan
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11581 all species →	30S/40S RIBOSOMAL PROTEIN S4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0022627 all species →	Cellular Component	cytosolic small ribosomal subunit	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSPYFP00000031893.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.