Gene detail

Detailed information of ENSPYFP00000033792.1 in Pteroeides griseum

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Pteroeides griseum · all data for this species · gene families

Sequence

CDS

Transcript

ENSPYFT00000035823

CGCCACGATCGCAAGTTGAGCGTGAGCTACTTATAccaaaattacaaatattattaaaatttacataatttcTACGTAATTTGGTAATTTATATGGAAGTGGAAAGCGATTGAGCGTGGTTTACAATTGCTATGCCACTTGTAACAGTATCAGATTCTCCCAAGAGGTCGGAACTTTCATTAACTTGCAAACACACATACCAACATGACTTTGAAACAAAGAAGGAAGGAAGTTAAACAGGAGAAACAGAAAGGTCCATCAACAAAAAAGAAAGTAAAGGAATCTGACCAGCTTTGGAAAATTCTGGTGGCTTTTGTGGTGATAATAGCCATTGCAACGGCAACCATTTATCTTGTAGGCAGCAGAAATGACAAACCATTGGAAGAGAAGATCCCAAAAGACACAGAAAAGAATGAAGAAGATAAGTCAACCCCAAGTCATaccaaaaataaaaaagttgtgAAGCAAAAACCAAAAAAACCTGTAATAACTAACAAGTATGACAAAACTATTTCAGAAGAGCTAAAAAGTGCtgacaaatttttaaaaaaaaaagattttgaTAGAGCAAAAAGAGCATTTGAAGCACTTATAAAAAATCATCCAGACAGTCCACGAGCTATGCATGGACTGGCAAAATCTTTGGATGAACTTGCTGAAGTAAGACGAAGTAATGAAGTTTTACAACAAGCTATTGATGCATTTGGAAAAGTTGGGAAAATCAAGAATTGTCCATCAGCATTGAAACGAATGGCTGGGCTAAGACAAGCTGAAAGGCTTGCATTTTTAGGTTCTTCTAGTGTTGCAGCAAAAGTCTTACTAGAGTTGGCACAAGGTCTGTCAAGTGATGTAGAGGTTTGGAACAAACTGGGGGTGCAATACTTGATAATGGGAAAAAATAGGCGGGCAAAGGAAACATTTGAAAAGGTATTAAAGATTAACCCAAATGATGGTTTTGGTCAAGTGCACCTTGCTTTTGTTCTTAAAAGTGAATCAAACTATGAAGATTGTATACCCTTTTTTGAAAAAGGTCTGGCTTCAGGTGAAAAAGGAACTGATGAAAGCAAGTTTTATTTCCATCTTGGCGATGCATACTACAGATTaggaaataaacagaagGCTTACGAGGTTTACGAAAAAGGTGCCAAGAATGGACATTTCTTGTCAAAGATGCAGAGATCATTATATAATGCTGATACACCATTACGTCCAAAACCATTTTGGAAACCAGAAGAAACTCCATACATCACCAGTATTAgGATGCTCGAAAATAATTGGAAAGTGATTCGAGATGAAGGACTTGCTCTTTATGATCCGAAGAAAGAAGCTTTTGTAAACGAAGATGAAGGTTTACGTGAAACAGGTTCATGGCAACAGTTCACCATGTTTAGTCAAGGCAGAAAAGATCCTAAAGCATGTCTTAGAGCacctaaaacttgtaaactagTTGAAAAAATTCATGATGCAGCTAGCTGTAAGCGAGGACAGATTAAATTCTCGGTCATGAAACCTGGTACCCATATTTGGGCACATTGTGGGCCAACTAACTGTCGTATAAGAGGTCATTTAGGACTTGTCATTCCTAAAGGTGTTCTGATCAGAGTGGCTGATGAAACAAGTACGTGGAAAGAAGGCAAGATGATATTTCTTGATGATTCTATCGAACACGAAGTGTGGCATAATGGAACTACCTTTCGTATGATATTGATTATTGATTTCTGGCATCCTGATCTAACTCAGAAACAAAGGAACACTTTGTCACCGATCTAAAAACAACTTCCTTACGCAAACTTCACTACGGAGAACTCCAGTGGAATTCACTATAAAACGTGTGAAGGCCATATTTTTTTAGCGAGatagatttttttaatttttatgtccaaaatattgaaataataTAGTGAGattgtatgtatatttttatttatttttgcttTGAACATAATAACATTTCTTTAGTATTGACTGTGTTGACTATAAAATAGTTACTACCCATATTTCATTGAAATTGTGGTGTGGTATTTTTTTCTGGAAGGAAAAATTCGAatgtacaatacatacatataaaccaGGACCTTATGCCTGGAATGAACTTGCGACCCAGCTGTCAACCAAGCATGTAGTtgagaaaaataattaaaatattaataaacagcAATTTCCTAGCATCAGGCCGAAACATTTCGATAacgctgtgacgtcatttgttgCATACCGTGTCTTTTATggcaaaatttctacagatttatgttgtttttaattaCGTTGTTTTCATGACTTGATGCTTCATCCGGAGGAATccagtaagaca

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13432 all species →	TPR_16	Tetratricopeptide repeat	Repeat	Interproscan
PF07719 all species →	TPR_2	Tetratricopeptide repeat	Repeat	Interproscan
PF05118 all species →	Asp_Arg_Hydrox	Aspartyl/Asparaginyl beta-hydroxylase	Domain	Interproscan
PF13181 all species →	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR013105 all species →	Repeat	Tetratricopeptide repeat 2	Interproscan
IPR007803 all species →	Domain	Aspartyl/asparaginy/proline hydroxylase	Interproscan
IPR027443 all species →	Homologous_superfamily	Isopenicillin N synthase-like superfamily	Interproscan
IPR039038 all species →	Family	Aspartyl/asparaginyl beta-hydroxylase family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12366 all species →	ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0018193 all species →	Biological Process	peptidyl-amino acid modification	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0042264 all species →	Biological Process	peptidyl-aspartic acid hydroxylation	Interproscan
GO:0062101 all species →	Molecular Function	peptidyl-aspartic acid 3-dioxygenase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00476	ASPH; aspartate beta-hydroxylase	EC:1.14.11.16	Cardiac muscle contraction	ko04260	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.