Detailed information of ENSVTRP00000010113.1 in Madracis senaria

Genomic Location: not available for this species
NR annotation: CAH3108717.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation MSENA · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B0JZ65Leucine-rich repeat and WD repeat-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=lrwd1 PE=2 SV=1
Q6GM71Leucine-rich repeat and WD repeat-containing protein 1 OS=Xenopus laevis OX=8355 GN=lrwd1 PE=2 SV=1
Q9UFC0Leucine-rich repeat and WD repeat-containing protein 1 OS=Homo sapiens OX=9606 GN=LRWD1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005297 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400
all species →		WD40WD domain, G-beta repeatRepeatInterproscan
PF13855
all species →		LRR_8Leucine rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR003591
all species →		RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR052489
all species →		FamilyLeucine-rich repeat and WD repeat-containing protein 1Interproscan
IPR019775
all species →		Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24370
all species →		OPTICINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K24733LRWD1; leucine-rich repeat and WD repeat-containing protein 1-Domain-containing proteins not elsewhere classifiedko04990deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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