Gene detail

Detailed information of ENSZOFP00000007348.1 in Porites cylindrica

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Porites cylindrica · all data for this species · gene families

Sequence

CDS

Transcript

ENSZOFT00000009559

AAGTCGCTCTGTGTGTATTTTCCAGAGTTTTTCCTTAAATAACGTAGAGGGAACAACTAACCTCAAGGAAATATTCCCAAAGAGCATCCAACAAAAGCAGGCATGTGCGCTTTTGTCAGAAAATCTCATTTCCGTCATGTTTTTGGAACGGCAGCAAAGAAGGACCACTGCTACGCCGAGGGGGTCAGAATATCAAAGAATTCTGTAGAGTCTCCATACTGCGCCGTTAATCCTAAATTCCTTGCTATCATTGTGGCTTCGGCTGGTGGAGGTgcatttcttgttttaaaacatGACGAGTTGGGCAGGCTTGATCCTGAGCATGGACGTGTTGGTGGTCACAAACAAGATGTCTTGGACGTGGCCTGGAATCCTTTTGATGACAATATGATAGCATCTTGCTCTGAAGACACCACTGTTAAGATTTGGCAGATTCCAGATGATGGGCTGGGCAAGACAAACCTGACTGAGCCCTTGCTAACTCTAGAGGGGCTTCACCAGCGAAAAGTTCATCAGATTCTATGGCACCCTACGGCAAGCAACATTCTTCTTAGCGCAAGTTATGACCCTTTAATTGTCATCTGGAATTTGGAGAGTGGTGAGGCTGTGGTTGAAATTGACTGTCACCCAGATCTTATTTACAGTGTTGACTGGAATACCAATGGAAGCCTCATTGCAACAACGTGCAAAGACAAGAAGATTCGAGTTATTGATGCACGAAAGGGAACAGTTGTTAAGGAGGCCAGTGGCCATGAAGGGGCTAAACCACAAAGAGTGgcattttgtgaaaatcttgGTTATCTGTTCACCTGTGGCTTTTCAAAGATGAGTGCTAGACAGTACGCAGTTTGGGATACAaaaaaagaaactctGGAGCAGTTGACCATGGAGGAAATTGATCAGTCTAATGCTACCCTTTTCATTCACTATGACCCTGACACAAAGATGATTTACTTAGCCGGCAAGGGTGACAGCATCATCAGGTATTATGAATTAGTGCCAGAATCTCCACATTGCCATTGGCTAACGAACTACAGTGCCACCACAGCCCAGCGAGGAGTGTGCTACATGCCAAAACGTGGCTGCAATGTCAACATCAATGAAGTAGCAAAGTGTTTTAAACTTATTGCTAAGGGAGCATCTGATTACTGTGAACCAATCAGCTTTACAGTCCCAAGAAAGTCTGAACTTTTCCAAGAAGATCTCTTTCCTGACACAAAAGGAGATGAACCTTCCCTTACTGCTGATGAGTGGCTTGAGGGAAAAGATGCAGATCCCAAACTGATCTCACTTAGACCGGTAGGTCCTGGAGCAGCTAAGACTGCAAAGAAGGTGAAAAAGGGACTTGGGGCACTTGGCAAAAAAGCACCAAAGAAAACAGCGCAGGCTGCTGATGAAGAGGATCTAGAGGAATTGGTGAAGAAGCTAAAATTGCAAGTGGACGAACAGGAAAAGCGAATCAAAGCCCTGGAAGAGAAAACGCAGAATTTATAAGTGTACTTGCAAAGGAAAACGAGAAGTGATAAAAAATAGGTTCAACTTGCTATTGTTGCAAATCAGTTCAGTTTGAAATTAACTTAAAGTTCTAAGCAACTCTTAAGCGTTAGCTGGTTAGCTTTCAAAATTGTATTTTTCGACCGattatttgtattaaaaattgttaaggATTTCAGTGGTGAAAGTATTTTCGCTGACTTGCAAAATTTCTAGTTGTATTAGTCCTTGTTTTTCGATTATAAATGATCTCGGCTGATTTCTCCTTTTATTGACCTCATGATCAGTGATACGATTTTTAAATGATTTGAAGATTCTTAAAGATAGGTGgaaactttttttccttttacacATTAAAGCCATTGGATTATAACTGCTTTGTCAGCATTTTCAAACAGTGAATAGCATCAATGTCTTCTTATCACTGGTTTATAGGCCaatttacagttatggatggaagcgaggttcgagttgaccttgttttaatacaaaccttcctgctttattatgaaAATCAAGTTGCCCTTATGCTAACTAGTgtttttcaaggacaattttCATGACAAAgcaaaggaggtttgtatcaaaacaaggtcaaccttaGTCTCACATCCACTGGAAGGCTAGTATAGGGTACTAAGTCCACgtctgtaaaatggtctattaaaTAACATGGTCATCAAAATAAAGCAAATGATCACTAACTGATGAAGTGTCGTGACTTAGTGCCAATTTATGAAGTTACCCGTGTGGGGTGCGAATGTTGGGGGCTCTTTACATGACACCGGAATGACTTTCTGAGACAGAAGCAGGTATGCTGCTGGTTTACATGACAGGAGAATGatgccgtaaaattccgaaaataagtcccggggcttatttttttcaaaggccctttttgaggggc

Protein

Gene family

Family type	Membership / link
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|CDC20 · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16300 all species →	WD40_4	Type of WD40 repeat	Repeat	Interproscan
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF08953 all species →	DUF1899	Domain of unknown function (DUF1899)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR019775 all species →	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR015505 all species →	Family	Coronin	Interproscan
IPR015048 all species →	Domain	Domain of unknown function DUF1899	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10856 all species →	CORONIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0007015 all species →	Biological Process	actin filament organization	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13886	CORO1B_1C_6; coronin-1B/1C/6	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.