Assembled genome (size, level, N50, BUSCO)
Predicted gene models with CDS / transcript / protein sequences
InterPro, Pfam, PANTHER, GO and KEGG assignments
OrthoFinder orthogroups and TF / ubiquitin families
RNA-seq samples with expression values (TPM)
Positive / negative co-expression edges
scRNA-seq datasets, cell atlas and marker genes
| Assembly name | jaPorCyli1.1 |
|---|---|
| Assembly level | Chromosome |
| Assembled by | GCA_964035525.1 |
| Genome size | 561.98 |
| Scaffolds | 109 |
| Contigs | 290 |
| Scaffold N50 | 37871096 |
| Contig N50 | 5276744 |
| GC content | 39.23 |
| BUSCO | C:99.8%[S:99.2%,D:0.6%],F:0.0%,M:0.2% |
| Protein-coding genes | 33535 |
| Proteins | 30453 |
| Chromosomes | 14 |
| WGS accession | CAXIUU01 |
| BioProject | PRJEB75339 |
| Submitter | WELLCOME SANGER INSTITUTE |
| Year | 2024 |
| Reference | Chromosome-level genomes of scleractinian corals: gene prediction and functional annotation Scientific Data [link] |
Availability shown here is recomputed from the live database every hour (last built 2026-09-16 18:01). If a data type is listed as unavailable for Porites cylindrica, it has not been generated for this species in the current release — the coverage matrix shows the equivalent row alongside every other species, and the statistics page gives the site-wide totals.
