Gene detail

Detailed information of ENSZOFP00000017895.1 in Porites cylindrica

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Porites cylindrica · all data for this species · gene families

Sequence

CDS

Transcript

ENSZOFT00000022679

AAAAAGAATGAGAAAACAGCAGAAAAAATCAAATAACTAAAGCGTGAAGGAAAGGAAATAGAAGAAGTCCCGTTAGCACAGAGCGTACATGAAACaatgaaattcttaaaaatGTTAGAGGACTTTGTAGCCGCTCCTTCCGGCTCAAGTGCAAAGACAATATGCGGTCGCATACATGAAGAGAGGCCCGATCAAACCAACATGGCGGCAACTATTCGGAAGGAAACATCTTGGAGACGACGTTGGAAACCAGATATAAACTCTCAAGCGTGGAAGCCATTCATCATTTCACGCAAAATATTTCTAGTAAAAACAATGTTTGTCGAGACGGAATGTTGTTATGAATTCTGCTTGTGGGATTTCAGTACTATGTGGTACGAAAAGCTTGAGCAGGACAACTTCAGAATTAGGGCAAAGGACCTTAACCCAAATGTTGAAGCAAAGCTTTCGTTCTTGCTTAAATTTGTGCAGAAGAGTATTGAAGAAGACAAGGAAAGAGAGGAAACATCATTTACAATAAATGAGGATGCTGCTTGTGACGATAAGCTTGTTATTAAAATGAAGACAAAATTGAATGCAGGTGTGCCGTTTGTTTGGGAATTTCACTGTTCAGTAGGAGAGAAGACCATGGTTGGATCGCATCTTGTACAGCCAATGATAGCCATGATAGCTGAATTAAACAGAAGACAGGCTGAACTTTTTACACTGCTGAGAAAAAAAGACCTGGAGATCATGGATTATAAGGAGTCGGGAGTCAGGTTATCAAGAAAAAGCCTTGGAACCTCAGAATTTGACGAGAATGCCTTTAACAGCAAGATGATTCTTTCACAGGGTTTCGAGGATGCAGTGAAAGATTCTGTAACAAAAGGGTTTGACGACGCTTCATGTGAATTGTACAAACAAGTCATGATCAAGAAGGCCTGGTTAGCGGAAAAAGATCTTCCAGAGctggatgatgatgatgatgatgacgatgatgatgagcTTTATGGATCAGTAGCGTATGGAGCAGTGGGGGGTCCCAGTGCCCCTTCATGGACCGATCTGCCTCCACCCTCCCTTCTAGGAAAAGACGATGAATCCTACACCACGTCACCCAAGCGATCCCCTAGAAAGACACCTGTTACGTCACCTTCGAAGTCTGGAATGTCGTCACCGGCTGGTTCACCTTCTAAGGACATGGAGCTTCAAAGACGAGAagcattgcagaaaaaattAGCCGAGGAAGCTGAAcgaaagaagaggaaaaaacgCAAGATAAACTTGTGATTAAATCTCACTTCTTGCAATTTTTAGTTAAGTTTACAGCTATCATGAGTTATGCGGAACTGTGCTTATACGGTACGTACCTTTCCCCACCAAATTAGTTGCTTATCAAGAGATTTTGCCATTACTTTAATTATcggtgaaaaaaataaaagaaaagtttatAATAGTGCGTTTTAATTGGGGTGACTTACATGTAATTGTGGTTCTACTTATCTATGAATTGTTGACAGTTGTATGACATGTTTCACTATCTTGGTTTCGGTTTTTCGAAGTGCCTTCCTATGCAACTTTTTGTACAATGTTTATTGAACGTGTTTTCCAGTTAAGATGTGCGtcttaaaatattttacaagaTTACTGCCCTCATACAAAGGGAAAGACAGTTCTGCATTAAGCTGTAAAAACAACGTAGGGAATAAAAGCCATCGTTGAAAGCAACAACTTCTTTTAACTTAGCACGAAAATTCACTCGTAAGTCACATCTTCCTTTAGATTTTTGTTGTGAGTAGACCAAGCCGCTTACATTTAAAATTACCGGAACAGGAGTTAAATTGTTAAGTAAGGACAATTTATTCGTCATACTGAAATTATAACTGACTTctttaccttctcgaaaatgaaataaatcatacTATAAAACGGCTTGAAACTTCTTGTTGATGGGGTCCTTAAACAAAACACCCGCTGTTTTTTTACAGCCGTTGTACTTGAAGAAGTTCATTTTACTGATTATACGTTTTAACGTGGCGGTTTCTCAGAGACACTTAAATCATGCCAGTTAATAAATCTGAGTTTACTGAAATCAAGGGCTCTGAGAT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09302 all species →	XLF	XLF-Cernunnos, XRcc4-like factor, NHEJ component	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015381 all species →	Domain	XLF, N-terminal	Interproscan
IPR038051 all species →	Homologous_superfamily	XRCC4-like, N-terminal domain superfamily	Interproscan
IPR052287 all species →	Family	Non-homologous end-joining factor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32235 all species →	NON-HOMOLOGOUS END-JOINING FACTOR 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006302 all species →	Biological Process	double-strand break repair	Interproscan
GO:0006303 all species →	Biological Process	double-strand break repair via nonhomologous end joining	Interproscan
GO:0032807 all species →	Cellular Component	DNA ligase IV complex	Interproscan
GO:0045027 all species →	Molecular Function	DNA end binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSZOFP00000017895.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.