Gene detail

Detailed information of ENSZOFP00000023045.1 in Porites cylindrica

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Porites cylindrica · all data for this species · gene families

Sequence

CDS

ENSZOFT00000029396

atgtggtttattggtgttgaagtagaacaagagacgagtgcaccccctcctaaaaaaaatcctggatccGAGCAGAATTCTCAAGTGGCATTTCCTGGAACTGTATTAGAACCTGTATATGTTGGTCAGCAGTCGTCATTCGATGCAGGACAAAACAGCAGTGCACAAGGAGTTTCTGATGTTCTCTCTCATCACCAACTAGCCAACAGTAATCTTTTTCCAGCTCACAGAAGTGGTAACCTTTGCTCAGATGATTATACCATTACTGAATTACAGCCAGTGAATTGCCAACCTTCTACTAGACTCAATAATTCAACATGGCCTGCCGTAGATAATCAGTTTTTTGACCCAAGGGATGTCGAGGGACTTGATCAGGAGGAAGACGGTCCATTTTCTGATGGTGAGGAGGAAAACATCGAGGATATGGAAATGCGCAATAAAATTCAACAGTGCTTGATTTTAAATAGAGATTATCAGATTGCAGTGTTAGATGAACTTGAAAGAATAGAGCTGGCTTTGgcaaagaacaaagaaaagcaGCTTGGATTGCATCAAATGAGAGCAAATAAAGATGAAGGGAAGCCAGAAGGTCACACATTAATGAAATTTGCTTATCCTTACTTCAGAGACACTGGTTTAgGTCCACCTGATAATGAAGACACGAAGTTAAAAAGACAGACTTGTCAGGTTGATGGCTACCTGATTCAAGAAAAAATATGGAATGCAAAAGAGAAAGAGCGCTTGGCTGAAGGAGTTAAGATGCAAAATTTGGAAAACAAACTCTCGCCAGTACTGCAGAAGATACAAAAATTAGAGCTTAAGAATGTGAAGACAAATAGTGACTTGAAGGAGCTTGAAGACCTTAAGGCAGAGAGCAGAAGAATAAAGTTAGTGCCAAAACGAACTAGTTTTCAGTGTCGCTTACAGTGGTGCAACTTTGATCACCCTGATGTGAACCGAACCCCATGGACTAAAGATGAAGATAAGAAGCTTCTGCAGCTGGCTAAGGATCCTAACATGACCTGGGTTGATATTGCACAAACCCTCCAGACCAAGCGAACTCCTATACACTGTTATGAACGTCACCAAAGAAGTTTAAACAAGAATCTTCTGAAGAGCAAGTGGACTCCAGAGGATGACAAACTGCTTCTTGATGTGGTGCGTGTTGTTGGAGTGGGGAACTGGGCAAGAGTGGCTAGCTTCTTAGAAGGTCGTCAGGGAGATCAGTGTATGCACCGTTATACTCAGACATTACAGATGGTAAGGAAAGGCAAGTGGACAGAGGAGGAAGACGAGCTTCTTAGAAAAGCAATTGAGAAGTACGGAACAAGTTGGAACAAGCTGTCTGAGATGGTTCCTGGCCGGTCAGGACCACAGTGTAGAGAAAGGTGGGTGAATGCCTTGGATCCTAAAATAGACAAAGGAGCGTGGACCAAAATACAGGATCAAAAGTTGCTTGAAAATGTGGAGAAATTTGGTCAAGGAAACTGGTCCAAGATTGCACGAGCCATTGGGAACCGTACTGATAATCAATGTTGGCGCCGATGGATCGTGTTACGCAAAGATGACTTTTTGTACTACCGTCAAAATACATTGCGGAAGAAGAGGGAGCTGGTGGCTAACTTTACTGGACGAAGACAAGAAAGACCATCGTTAAGACCAGAAGTAAGTCGCAAGGCAAGAGGACGTATCCCGCTTCCACCAGAAGAGTCTCGAGAGAGGCGAAGATTAACAAGACAGAGGTTTAGAGAGAAGAAACGGGCAGAGAAAATACGAGCTGAAGAGGAAGCCAAAGCAAAGATGGTACAAGAAGCAGAGGAAACAGAGGCGGCAAATGAGGACGAACAAGAGGAGTCAGAAGATATGAGGGATGACAATGAAGAGGTCAAGGAAGTAGCAAAGAAGCCTCGAAACAGGAAAGCGGGAGTAAACAGGGCTAGAATCCAGCAACCCCATTCCCGTGAACTAATGAAAAACAGCCCAACCAAACGTGAACTGATGAAAAACAGCCCAACCAAACGGAGGAATATTGGCgaaatgaaaaggaagaatCAAAAAGGTGCTTCTGCCAAGGATAAGACGAGTGCAGTGTCGGGCTTTTTAGGGCCTTTCTCGCTGCTTCTGCAGGCCTTCAGCATCGACATCCCTACGGTTCTTAAAGCCATTCAGAACACTTCGACCAACCCTGCCTCGTCGCACACAAACGTCACTACAACCGCTGAACCCTCGGTATCACTTGAAAACACTGCCGCCGTAGATGAACAGAAGGAACAAGCGGGTGATGCTACAAGAAAGCAGCAGAGCCAAGCTAGCCATGATCCTGGTAAGTCCCAGTTGCCCTCAAGTAACATCTCTCAGTCAAATATGCACCGAGAAGCTAGTGATGGCATGTTAGAAAATCAGACCAGAGGAGATCAGGGAAGACAAAGAAACCTCCAGAACGCAGAATCAGACTTGCAGTTGCCAAAAGAGAAAAGTAATATGGGCGATCATCAGGGGAATAAAAACCCGAATAAAGGGAATACTCCTATCGGCCTGCAAACCGCGAGAAAGGACAATGGAACTACAGCAGCGGAGCCAATGAGGGCTACTCCGTCTGCAACAAGCCAGGCTCCCCGCACGCGGGCACCAGCAATTCCTCCTCTTCCACCCTCCTTTACAACTCTGAGAACGTTCAAAGCCCTTCTTCAACTCCGCCCTGAGTTGCAGAGAATAGCTGCCTTGTTAAATCCCTCCCCTGAGTGCGGTACAGCAAGATCACAAGCACACCAACCGCCGTTAGCATCGGCCTGTCAAGCAGTCCCTTCTGGTAGCCATGGTAACAAAGAGTCCGGTGCACTACGCGTTATACGTGACGTAGAGTCAGAGAAAGACAAtaCAGGTCTCTGTGTTTCTGTTGGAAATATTACAACTGATGACACTTCAAAAACTGGACTCACCCAGTTAAATAAACAGGTTCCTGAAATAGCGCCTAGTGATAGAACACTCATACAGCCGGCAAGTGCTTTACAGACACCATCAAACGAAGCGGGGCATGCCTCGTTCAGGGCCGGTAAACAAACAAACGCCTCAATAAATACAAGTTTACCACCTCACGGTGGGTCAAGTATTGTCGAAAACAACAACCAAGGCCCAACGGCAGTTACAAGGTCTCGTGCATACCGTAATTCGTACGAGTACAAATTGTTATCCTCACGATTCAGTAGTTTGTTCCTCTGGCCAGCCCTTCTTTCTAAAATTCCAGTCAGGTTTACCTCGCAATTTGGACCAAGCTTTGCTCAACAACATCCCCCGCCTAAATTAATTCCTCATCCAAAACGCAGGCATCCTGGTTTAGCAGCAGTGAGGATGGCTTCGACGGCGTCTTTTACGACCCCAGCACAGCAGCTTTGTACATTGGCAAAGGGATCAGCAATTAGAAAGGAGAGCAACCCTGCGGAAACGGCGGGCACGGCAGCTCCGCCAGAGGAGGACGCGGCGTCTACTGACACGAATGAAGTAGTTTTCGCTGCGTCTCAGCTGGTGTCCTTACACAGTGCAACAAAGTCGCGGGCAGCGTCCCGCGCTCAGGGCAAGAGATCTTACAACACACGTTTACCAGTGAAACGAAGGATTGTTGAAAGTTCGTCTTCTTCATCAGATGATGAGACTTTTGTGATCGATGAACGACAGTGGAGAAGTCAAAACGAAGACAATCGACCTGCCAGAGTAACCCGTCAAACAACCCGAAGACTCGCAATGGTACCAGAAGAAAGAGTCGGCACAGTGACAAGTGCCCAGGGAACGTCTTCCTCCCCAATACAGCAGGTTGGCAGTAACTCTAATGTAAATGCAGTTATCTCGATACCTTCTGATTCCACCGATGAAGCGCCGCCCAAGTCACCGGTACTGGTCGTCAGAACTAGAGGACAAGACGACGCCCCTGAGCAGGTGTCCCGAGTAACTGCCAATCAGAACGCGACGCCGTCAAAAAGAAGCAGGAACAATAGCGAGGCCTGCAGCCCCTCGACATCGAGCTCCTCAAGGCGGAAAAATCCGCGACCCCTGATCGTCAGTACTGGAGAACAAGAGGACGCTCCTGAGGAGGAGTCCAGAGCAacggccaatcagaacgcgaCGCCGTCGAAAAGAAGCAGGAACAATAGCGAGGCCTGCAACCCCTCGCCATCGAGCTCCTCAAAGCGGAAAAATCCGCGACCCCTGATCGTCAGTACTGAAGAACAAGAGGACGCTCCTGAGGAGGAGTCCAGAGCAacggccaatcagaacgcgaCGCCGTCGAAAAGAAGCAGGAACAATAGCGAGGCCTGCAACCCCTCGCCATTGAGCTCCTCAAAGCGGAAAAATCCGCGACCCCTGATCGTCAGTACTGAAGAACAAGAGGACGCTCCTGAGGAGGAGTCCAGAGCAacggccaatcagaacgcgaCGTCGTCGAAGAGAAGTGGGGAGTGCAAACTCACACCATCCAGATCCTCAAAGCGAAAAAACCCACGACCCCAAAAAAACCGTGGCGCTTGCTGGAGAGCCATGCTTCCAACAGTTTCTGCTGATGATGACGACTCGCAGTGA

Transcript

ENSZOFT00000029396

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00249 all species →	Myb_DNA-binding	Myb-like DNA-binding domain	Domain	Interproscan
PF13921 all species →	Myb_DNA-bind_6	Myb-like DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001005 all species →	Domain	SANT/Myb domain	Interproscan
IPR017884 all species →	Domain	SANT domain	Interproscan
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR051575 all species →	Family	Myb-like DNA-binding	Interproscan
IPR017930 all species →	Domain	Myb domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46621 all species →	SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0001006 all species →	Molecular Function	RNA polymerase III type 3 promoter sequence-specific DNA binding	Interproscan
GO:0019185 all species →	Cellular Component	snRNA-activating protein complex	Interproscan
GO:0042795 all species →	Biological Process	snRNA transcription by RNA polymerase II	Interproscan
GO:0042796 all species →	Biological Process	snRNA transcription by RNA polymerase III	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09453	SNAPC4; snRNA-activating protein complex subunit 4	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.