Gene detail

Detailed information of ENSZOFP00000026183.1 in Porites cylindrica

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation PCYLI · all data for this species · gene families

Sequence

CDS

ENSZOFT00000033213

ATGGCTTTTCTGCAGATTTGTCGCCGACACCAGAAACTTTTCGAGGGTGCTAGTGCTTCGGTAAAGCTTCTTTTGACAAGGAAAGGGTTTCAAAGTTGTGCAAGTAATGTTTTCCTCTTTTACCATCATTTAGAGAAGAAGACATTAAATAATGACAACTTTCTGGAACCAAAATTACACAACTTCCAATCCACACATGGGTTTTGCACTGTAACGTCCCCTCTTGATCAGAAAGTTGCTCCCTCAGCAGCAAAAGATGTTTCCGCAGTTGACAGAGGCCACAAGAGGAAAACTAAAAAAGCAGAaagtaacaaaaagaaaacagataaAAGTAGTGCTAAAAGCACTGAAACAGCTAAAGGAACAGACTCCAAAGAGATTCAGAATAATGACACAGATAGTGGAGCAGCAAAAAAGAAGAATCCTTCTCATAAATATGACTTGTCAAGGAATAGTGAAAGAAAAAGTGAGAGGACATTATTGGAGAGTATAAATAAGCAGAAAAAAGGAACAAGTGGATCTTCAAAACTAAGTAAAGAGAATAAAGATGTACTTGTGACAACAGTAGGGACAGCTGGGAACGATGATGAACATATGTTAGATTATGGTCCTGAAGCTATCTTAGTTGCGGGGGAGGATGATCATCATGATGAAACAGAAATGGAGGATCTTGGCGATGTTTCTCATCTAGTAACAACAAAAGAATTTGCTAAGGAAAAAGATGACATTGATTTGGATTTTCTTAGTGATGATGAGGAATCTACTGTAAGAACAGAGAGTGTAGCTGCATTGGAGGAACTTGAAATCACATCTGGTGCAATGTTTGACAGTGTTGTTCAAACTCCTAAAAAATACAGAGAGGGAACAGCAGGTGGAAGGCTTTTTGAAGCACAGACTTTGGCTGAAATAGATGGATATCTGTTTCTAGGAAATCCCTATCAAGCTGAAAAGCTGTTCAACAGGTATCTGAGAATGGGAAAGAAGTTTGGTGTAAATACTTTTAACAAACTACTTCATGGCTGGGCACAGAAAGGAAACCTGATGAGTGTTAAGTTGCTGTTTAGACTGCTTAAGAGAGAAGGTTTAGAACCAGATATGGGAACCTATGCTGCAATGCTGCACGGCTATGGCAAATTTGATGATGTAGATGGTGTTCGGAGTGTCATTAAAGAAATGGAGGAGAAGGAGTTTGATATCAGGCACATATTCCACAAGTGCTGTCTAACAGAACCTCAGGCTAAAGGAGTTTTGAAGGCATTAAGACTTATCATCCCTGATTACCAACCAAGTACTCCAGAATCACGGAGCCAAATCAAATATCCCACCCTTGTAAAGTCATGGTATTCAGACAGGGTTAACTTAGATGAAAAACTGCAAAGTGTTCCTGGAAAACTTGAAAGAGAACTAGATGAACCAAGACTCAAGGAGCTTTTTGAGCAGCAAATTTTACAGGAACTATCAGGGTTTACACCCATAAAGTCAGTCGAGGATGACAAAGGGGACAGTGAATTGAAtcagaaaagaaaggaaatgttTTTAGAGTGCCGCAGCAAATGGAGAAAAGCTTTAATTGAGAGCATTGAGAAAGAGTTGTTTGAAATCAAGAACTCCAAAGGGAAGTCTGTACACCCCAGATTTGCACCTTTCTTCCAGGCATTTGAACCTGATGAGCTCGCTGATATTACCTTGGACACCATTGTGTTTTATGTGAAAGGACGTGTTGAAGGTGTACCTTTATATGGTGTTAGTGGAGCATTGGGCTCAGTGCTTAACACAAAGTACATTGTGAAACACAGAGTACAGTCTGGAATGTTGGACAAGATGAAGGGCATATATCATGACTATTTTTCTTATCTGATGGATGAGAGGCTTACAGCGAGGAAGATGGCTCGAGAGTTCTGGAATGAGCTGGATGATATGCTTCCTTTTGGTGGTTCACTTCAGCAAGAAGTTCCAATCTGGCCCTGGGCTACAAAAATAGTATTTGGATGCTCATTGGTGGATTGCTTCCTCAAGTCAGCTCAAATTAATGTGAATCTCTTCAACAATCGCCCAGAGGAGTTGATTCTTCCAGCTTTTTACCACACGTACGAATTCAAGGTGAACAAGAAGCTGGGAGTGTTGAAGCCACACCCAGTCGTCTGTAAATTGTTCAAGGAGTATTTGGCGAGTCAGGGAGAGATTTCTATGGAAACAACATCGGTGCCAATGCTGGTCCCACCACGTCCATGGAGAGCAACCAAGGATGGCGCCTACCTTATCTTACCAGTTGAGCTCGTTCGCAGTGCTGGTGATGAAGAAGGTCGGTATGACAAACTGCTGGAGGAGAAAACAAGTAAGGAAGACTTGGTTGCTGTATTCGACTCCCTGAACTTCCTTGGGTCTTGTGCGTGGAGGACAAATAAACGAATACTGGATATTGCCATTCACATGTTTAACACTGGTGGGAATGATGACTTGGCTATACCTGGTCCTGTGGCCGAGCCTCAAGTGGAGTCAAAATCGCCTAAGTCTAAAACTAACgcagaagaaagaaggaaacaaaTTCAAGAAAGACGAATCGCCAAGAAACTGGCGCGTGAACAGTACTCCTTGCGCATGTCAGCTTTGTACAAACTCTCTGTCGCCAATCACTTCCGTGATCACGTTTTCTGGCTGCCAATCAACTTAGACTTCCGGGGAAGAGTCTATCCTATTCCTCCACACTGCTCGCATGTCGGGGATGATCTAAGCCGAGGAATGCTTCAATTTGCCAAGGGTGTCCCTTTGGGGGAGAAGGGTCTGGATTGGCTGAAGATACATCTTGTGGCGCTCCAAGGTACTAAGAAAAAATCTTCACTAAAAGAACGTCTTCAGTATGCTAACGACATTATGGACGATATATTGGACTCAGCGGACAATCCCCTGACGGGTCGAGGATGGTGGAAAACCGCTGAGGATCCTTGGCAGGCGCTGGCCACATGCATGGAGATCGCAGACGCTACCCGTTCCCCAGACCCTACGCAGTTTATTTCCCATCAGCCTGTTCATCAGGATGGTTCTTGTAACGGGCTTCAGCACTACGCTGCTCTGGGTCAGGATACGTACGGCGCTAAACAAGTAAACCTACTGCCCGCTGACAGGCCACAAGATGTTTATGAGGAGGTCGCTAAACTTGTCGAAGCTGCTCGGTTGCGTGACGCTGAAGCTGGTCACGAAATTGCTAAAGAACTTGAAGGCAAAGTCACTCGTAAAGTGGTGAAACAGACGGTTATGACCATTGTTTATGGCGTCACGTTCGTTGGTGGTCGATTGCAGATTGAGCGCCAATTAAAAGACCTGGAAATGAAtgacaaagttatttttaaggcTTCTACATACCTGGTCACCAAGGTTTTCGCAAGTATTGGGGAGATGTTTACTGCCGCAAGAGCCATCCAAAATTGGTTTGCCTCATCAGCCACGCAGATCGCTTTGTCTGGTCATTACGTGGACTGGTACACACCCCTTGGTCTGTATGTCAGTCAGCCGTACTCCAAGAAGCCTCCTCAAAAAGTCGTACGCACCAAGCTCCAATGGATGTTAATTAAGTCCAAAGGTCTACCTCACGTCCCACCCGACTCTAGAAAGCAGCGTGGAGCCTTCCCGCCAAACTTTGTCCATTCGCTGGACTCTACTCACATGATGTTGACCGCGCTATTTTGTCAGCGATCTGGCGCGACATTTTCGTCGGTACACGACAGCTTCTGGACACATGCAGCCAATGTGGGAGTAATGAATCGAATTTGTCGTGAACAGTTTGTTGCGCTTCATAATGAGCCAATATTGGAGGAACTTCATGAACATTTCCACAAGAATTACTCAGACCTGAAAATTGTTTCGAAAGAGAAGACTGCAAAGAATAATTTACACGCCACAGCACTAACAAGCTCATTCCTCTACTATCTGTTAACAAACTCAAAGGTTTTTCTCTTTAGATTACGTTATTAA

Transcript

ENSZOFT00000033213

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00940 all species →	RNA_pol	DNA-dependent RNA polymerase	Family	Interproscan
PF13812 all species →	PPR_3	Pentatricopeptide repeat domain	Repeat	Interproscan
PF14700 all species →	RPOL_N	DNA-directed RNA polymerase N-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002092 all species →	Family	DNA-directed RNA polymerase, phage-type	Interproscan
IPR046950 all species →	Domain	DNA-directed RNA polymerase, C-terminal domain, phage-type	Interproscan
IPR002885 all species →	Repeat	Pentatricopeptide repeat	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR037159 all species →	Homologous_superfamily	DNA-directed RNA polymerase, N-terminal domain superfamily	Interproscan
IPR029262 all species →	Domain	DNA-directed RNA polymerase, N-terminal	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10102 all species →	DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003899 all species →	Molecular Function	DNA-directed 5'-3' RNA polymerase activity	Interproscan
GO:0006351 all species →	Biological Process	DNA-templated transcription	Interproscan
GO:0001018 all species →	Molecular Function	mitochondrial promoter sequence-specific DNA binding	Interproscan
GO:0006390 all species →	Biological Process	mitochondrial transcription	Interproscan
GO:0034245 all species →	Cellular Component	mitochondrial DNA-directed RNA polymerase complex	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10908	POLRMT, RPO41; DNA-directed RNA polymerase, mitochondrial	EC:2.7.7.6	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.