Gene detail

Detailed information of ENSZOFP00000033871.1 in Porites cylindrica

Genomic Location: chr8:11786785...11790209
NR annotation: no NCBI-NR hit recorded
Species Porites cylindrica · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSZOFT00000043460

ATGTCTAATCATTCGAGTCTTTTTGCAAGCTTTTCTTCCCCAAATTCGTCATGGTATCgggaaaaaagagaagaacAGTGGAGCCCAAGAAGCCAAGAAAGTGACCTCGAACCGAGCTTTGATTCCGACGAAGAAAATCACGCGTCAAAAGCAATTACCATCTATAGTGATTCAAGCTCGGGATTGAGTTCTCTTGAGTCATCTCCTCTTGTTCCGTGGCCTGAAAACTCTTCCTATTTACCTTCATCGTCGTCTAAAAGCTTGGTTTTGCATCCTAGAGGTAACAGTTTGACTCAGGAAGGCACTTTGACGGCACAATGCAAAGCTACTAGCCTTCGCGTATCAACTTCCCTCGTGATTGGGAAGCGCCCTCGTGCTCTTGGTCTTAAAGATGTTGACCTGTCTAAAAACGTTATGGCAAGGCATATTCGAGAAGCAAAAGAAGCAAATAAAAGCCCCAAGAAGAGTACTTTCCGCAGTCCTTTATCAAGGCATGTGTCTTGTCCTATTTTCAGTTGTACCAATGACAGCTTTATGGGTCTGTCTGACAGACATGGTGTTCCTGGAAAAACTGGTCAAATCGGTGAGAACCGAGATTTGAACTTTGTCAGCACTGTGCAGCGTAACTCACCAGCAAATACTTTTTCGACTCCAGCATCAGCTGGGAAAGTGAGATTGTTTAGCTGCCCAGATGATCAACTCAACTTTGACCAACGGCATGATACCTGTCATCAGGGCTGGCATGATGAGCTTGACCCAAGTGATGGAACAGATAGAAATTTCACACCAAAAGTCATTGAAGTCATTGACTTGACTTCAGGCGAAGCGACTTCAACTGGCAGAATAACAAATTATAGCGACAAGGCAACTTACAAAGATAGCTGTCAGAAAGATGAGAGTATCATGGCACTAACAGCAGCCAGCCAGAATCATTCACCTTTTAAGAGGagagtttcaaacaaaaaatctGTGTTAACTTTTAGTGATGATGAGGACAGTGACTCAAAGAAGCAAGATCAGGTTCATTTTTCATTGAAGAAATATGTTTCAAGGAAAAGATCTGTGCTATCATTCAGTGATGATGAAGAAGACAGCGATTCAGCAGGACAAAAAAGTGTTGAAGTAACTGGGGAAAAATCACAACAGGTTATTCAAGGTGGTGAGGAAGTTTCGTTCAAGAGTAATTATTATAAGAGATACATGAAAATGGGCGTACTTTTTGCATTATTTGTATTGTTGTTATCAATTTACTTGCACAAAAATCCTCATGGCTTTTGCCTAGATAGTGAATTTAGCAAGAATATTTCAGGGATTGGCCTAGCTCTCAAGGCTGAAGTATACGGTCAACACATTGCCCAGAAGGTGGTGACCTCAGCCCTGAAGAATCACTTTGCCAAATACAATGCAAGAAAGCCCCTAGTACTCTCCTTCCATGGATGGACTGGAGTTGGAAAAAACTTTGTTACCAGCATAATCACAGAGCATTTCTTCAAGCACAAGACCCACAGCTCATTTGTTCACAAGTTTATTGTTCCTGTTCATTTCCCACATGATTCTGAGATTGACAAGTACAATGAACAGTTGCGCAGTTGGATTCAAGGCAACATATCTCAGTGCAGTAAAGGTGGCTTGTTTATCTTTGACGAAATGGATAAAATTCATCTTGGCATGATGAGTACCATTAAAGATATCATCTTAAGTTTCCGTGGTAGGGAAGTCGCAGCAGGTTATCAAAACATGGTGTTTATATTCCTGTCCAATTCTGGCGGTCATGCTGTAAATCAGCATGTCTTGAAGCATGCACTTGATGGAAAACTAAGGCAATCTTTGATGCTAAAAGAAATAGAACTTATCTTTCAAGGCATGATCAAACAAACTCCTGATGCATGGTTTGCTGATCTTTTAAAATCAGACGTTATTGATCATTTAGTTCCATTTCTACCATTAGAGAGAACACATGTTAAACAGTGCATAAGAAGAGACTTAATCATGAAAGGATTTCATGTTAGAGAAGCTTTAGTCTCGGAGATTGCAGATCAGATGGAATATTTTCCCGATGGGCATGGATTCTTTTCAGTGTCAGGGTGTAAAAAAGTTTCATCTAGGGTAGATGTAATCGTGGGATAA

Transcript

ENSZOFT00000043460

ttttatttttctttttattattacaGTATTTTTGTCTTACATTTCTGATCTTTAAATTATcagaatgatgatgatgttattTCCCAACACTCTACACACACAGCATACATTGTTATGAAGAGTTGCGAATGCCCTGGGTTCAAGATAACATTACAACCAATCAAAACCATCAAAACCAATCAACCAACCAATCTCCACcaatcgaccaatcacaattCTAGAAAATTACCCGCCCTAGTCCCTCTCCTCATTTCCAGCGGCAACATATCTTTTTCAACGTTAAAAATCAATGAGTGATCATGTCTAATCATTCGAGTCTTTTTGCAAGCTTTTCTTCCCCAAATTCGTCATGGTATCgggaaaaaagagaagaacAGTGGAGCCCAAGAAGCCAAGAAAGTGACCTCGAACCGAGCTTTGATTCCGACGAAGAAAATCACGCGTCAAAAGCAATTACCATCTATAGTGATTCAAGCTCGGGATTGAGTTCTCTTGAGTCATCTCCTCTTGTTCCGTGGCCTGAAAACTCTTCCTATTTACCTTCATCGTCGTCTAAAAGCTTGGTTTTGCATCCTAGAGGTAACAGTTTGACTCAGGAAGGCACTTTGACGGCACAATGCAAAGCTACTAGCCTTCGCGTATCAACTTCCCTCGTGATTGGGAAGCGCCCTCGTGCTCTTGGTCTTAAAGATGTTGACCTGTCTAAAAACGTTATGGCAAGGCATATTCGAGAAGCAAAAGAAGCAAATAAAAGCCCCAAGAAGAGTACTTTCCGCAGTCCTTTATCAAGGCATGTGTCTTGTCCTATTTTCAGTTGTACCAATGACAGCTTTATGGGTCTGTCTGACAGACATGGTGTTCCTGGAAAAACTGGTCAAATCGGTGAGAACCGAGATTTGAACTTTGTCAGCACTGTGCAGCGTAACTCACCAGCAAATACTTTTTCGACTCCAGCATCAGCTGGGAAAGTGAGATTGTTTAGCTGCCCAGATGATCAACTCAACTTTGACCAACGGCATGATACCTGTCATCAGGGCTGGCATGATGAGCTTGACCCAAGTGATGGAACAGATAGAAATTTCACACCAAAAGTCATTGAAGTCATTGACTTGACTTCAGGCGAAGCGACTTCAACTGGCAGAATAACAAATTATAGCGACAAGGCAACTTACAAAGATAGCTGTCAGAAAGATGAGAGTATCATGGCACTAACAGCAGCCAGCCAGAATCATTCACCTTTTAAGAGGagagtttcaaacaaaaaatctGTGTTAACTTTTAGTGATGATGAGGACAGTGACTCAAAGAAGCAAGATCAGGTTCATTTTTCATTGAAGAAATATGTTTCAAGGAAAAGATCTGTGCTATCATTCAGTGATGATGAAGAAGACAGCGATTCAGCAGGACAAAAAAGTGTTGAAGTAACTGGGGAAAAATCACAACAGGTTATTCAAGGTGGTGAGGAAGTTTCGTTCAAGAGTAATTATTATAAGAGATACATGAAAATGGGCGTACTTTTTGCATTATTTGTATTGTTGTTATCAATTTACTTGCACAAAAATCCTCATGGCTTTTGCCTAGATAGTGAATTTAGCAAGAATATTTCAGGGATTGGCCTAGCTCTCAAGGCTGAAGTATACGGTCAACACATTGCCCAGAAGGTGGTGACCTCAGCCCTGAAGAATCACTTTGCCAAATACAATGCAAGAAAGCCCCTAGTACTCTCCTTCCATGGATGGACTGGAGTTGGAAAAAACTTTGTTACCAGCATAATCACAGAGCATTTCTTCAAGCACAAGACCCACAGCTCATTTGTTCACAAGTTTATTGTTCCTGTTCATTTCCCACATGATTCTGAGATTGACAAGTACAATGAACAGTTGCGCAGTTGGATTCAAGGCAACATATCTCAGTGCAGTAAAGGTGGCTTGTTTATCTTTGACGAAATGGATAAAATTCATCTTGGCATGATGAGTACCATTAAAGATATCATCTTAAGTTTCCGTGGTAGGGAAGTCGCAGCAGGTTATCAAAACATGGTGTTTATATTCCTGTCCAATTCTGGCGGTCATGCTGTAAATCAGCATGTCTTGAAGCATGCACTTGATGGAAAACTAAGGCAATCTTTGATGCTAAAAGAAATAGAACTTATCTTTCAAGGCATGATCAAACAAACTCCTGATGCATGGTTTGCTGATCTTTTAAAATCAGACGTTATTGATCATTTAGTTCCATTTCTACCATTAGAGAGAACACATGTTAAACAGTGCATAAGAAGAGACTTAATCATGAAAGGATTTCATGTTAGAGAAGCTTTAGTCTCGGAGATTGCAGATCAGATGGAATATTTTCCCGATGGGCATGGATTCTTTTCAGTGTCAGGGTGTAAAAAAGTTTCATCTAGGGTAGATGTAATCGTGGGATAAACTCCACAATGAAGACTTACAATCAACAACAatattagttgagacactttgccctaaagGGGCTTTCTGACACTTTACTGCCTTCCAGaggagaaaataaagcttttcctcccccatcccctccatgcaatctTGTGCTgctgttcgagctacctatagaaaacaacaaacaccccaactttgagtGAAGATGAGGGGGAGAGGTGTGGATTCTTTTGAACTCTgtagttaccctatttgagtacaatgtctcaacaattttgtctcTGATTGTCTGAATCATGAAAGTGGCCATACATCCTGAAGAAAACTAATTCAACTCATTTCTTCGCAGTGGGATGTAAAACCCTTGTTGCCTTTTTATTTATGATTCGTGTAATCATGCCTACTTTAGAACTCAAAAGAATATggtaattttgttattttcagtgcGCTTAACATGCCGTGACATCATGTGATGTAGCATGTTGcacctatttctttttttttctttatcaaaaCATGGAACAAAGTAAAAAGGATGGAAAACAAAATAGTTTTCTAGGCAACAAAGCAGTTATAATTGCTAAAATTACTGTTTAGAAATTCCCATGAGTAACCAGGATgagtaaaatataaaataattcGATTATCTTTTAGAACAAAGTTAGTTACTTGTTCCCAATCTCCTCCTATTTATAGTTTCTACTGTAAAGTACATTCTtcaaacaatctgaagatttggTAGTAGTGCCTGCTTATCACAGCTGAGTAGTAGTTCTGCATAAAAAGTAGAAAcaattcggcatgggatttttggggggttaatttttggtccagggatttttgggggatttgaattttgcccccattcgatcatccccatcacttgaaatccagagtacccccATGGGTCCTTTGCCTACTTTGTGTCAAGCTCTAtactttgtttctgttgttcaCAAACATTTAAGAAATCCCccactttattttgaaaaatagtgaacaaaaaaattcagt

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001479 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21376 all species →	TOR1A_C	Torsin-1A, C-terminal domain	Domain	Interproscan
PF06309 all species →	Torsin	Torsin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR049337 all species →	Domain	Torsin-1A, C-terminal domain	Interproscan
IPR010448 all species →	Family	Torsin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10760 all species →	TORSIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22990	TOR1; torsin-1	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.