Detailed information of EVM0001378.1 in Myxobolus honghuensis

Genomic Location: Contig00935:1325188...1329841
NR annotation: KII66615.1, E3 ubiquitin-protein ligase listerin [Thelohanellus kitauei]
Species Myxobolus honghuensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003807 (this species only)

 Pfam domain
No Pfam domain signature was detected for EVM0001378.1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR039795
all species →		FamilyE3 ubiquitin-protein ligase listerinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12389
all species →		ZINC FINGER PROTEIN 294Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0043023
all species →		Molecular Functionribosomal large subunit bindingInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan
GO:0072344
all species →		Biological Processrescue of stalled ribosomeInterproscan
GO:1990112
all species →		Cellular ComponentRQC complexInterproscan
GO:1990116
all species →		Biological Processribosome-associated ubiquitin-dependent protein catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K22377LTN1; E3 ubiquitin-protein ligase listerinEC:2.3.2.27
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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