Gene detail

Detailed information of EVM0002268.1 in Myxobolus honghuensis

Genomic Location: Contig01003:1561907...1562492
NR annotation: KII68643.1, 60S ribosomal protein L9 [Thelohanellus kitauei]
Species Myxobolus honghuensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q95Y90	Large ribosomal subunit protein uL6 OS=Caenorhabditis elegans OX=6239 GN=rpl-9 PE=1 SV=1
O74905	Large ribosomal subunit protein uL6B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl902 PE=1 SV=1
Q963B7	Large ribosomal subunit protein uL6 OS=Spodoptera frugiperda OX=7108 GN=RpL9 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008067 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00347 all species →	Ribosomal_L6	Ribosomal protein L6	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002359 all species →	Conserved_site	Large ribosomal subunit protein uL6, conserved site-2	Interproscan
IPR036789 all species →	Homologous_superfamily	Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily	Interproscan
IPR000702 all species →	Family	Large ribosomal subunit protein uL6-like	Interproscan
IPR020040 all species →	Domain	Large ribosomal subunit protein uL6, alpha-beta domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11655 all species →	60S/50S RIBOSOMAL PROTEIN L6/L9	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0019843 all species →	Molecular Function	rRNA binding	Interproscan
GO:0002181 all species →	Biological Process	cytoplasmic translation	Interproscan
GO:0022625 all species →	Cellular Component	cytosolic large ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02940	RP-L9e, RPL9; large subunit ribosomal protein L9e	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.