Detailed information of EVM0003167.1 in Myxobolus honghuensis

Genomic Location: Contig00111:1178277...1179022
NR annotation: KII74608.1, Protein SDE2 [Thelohanellus kitauei]
Species abbreviation MHONG · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7T293Splicing regulator SDE2 OS=Danio rerio OX=7955 GN=sde2 PE=2 SV=2
Q07G43Splicing regulator SDE2 OS=Xenopus tropicalis OX=8364 GN=sde2 PE=2 SV=1
Q8K1J5Splicing regulator SDE2 OS=Mus musculus OX=10090 GN=Sde2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005684 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13019
all species →		Sde2_N_UbiSilencing defective 2 N-terminal ubiquitin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051421
all species →		FamilyRNA Processing and DNA Damage Response RegulatorInterproscan
IPR024974
all species →		DomainSde2, N-terminal ubiquitin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12786
all species →		SPLICING FACTOR SF3A-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K25059SDE2; replication stress response regulator SDE2-DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP