Detailed information of EVM0003206.1 in Myxobolus honghuensis

Genomic Location: Contig00439:310676...317063
NR annotation: KAF0991329.1, hypothetical protein HZS_6108, partial [Henneguya salminicola]
Species Myxobolus honghuensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002577 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04054
all species →		Not1CCR4-Not complex component, Not1RepeatInterproscan
PF16415
all species →		CNOT1_CAF1_bindCCR4-NOT transcription complex subunit 1 CAF1-binding domainRepeatInterproscan
PF16418
all species →		CNOT1_HEATCCR4-NOT transcription complex subunit 1 HEAT repeatDomainInterproscan
PF12842
all species →		DUF3819CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007196
all species →		DomainCCR4-Not complex component, Not1, C-terminalInterproscan
IPR032191
all species →		DomainCCR4-NOT transcription complex subunit 1, CAF1-binding domainInterproscan
IPR040398
all species →		FamilyCCR4-NOT transcription complex subunit 1Interproscan
IPR032194
all species →		DomainCCR4-NOT transcription complex subunit 1, HEAT repeatInterproscan
IPR024557
all species →		DomainCCR4-NOT transcription complex subunit 1, domain 4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13162
all species →		CCR4-NOT TRANSCRIPTION COMPLEXInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000288
all species →		Biological Processnuclear-transcribed mRNA catabolic process, deadenylation-dependent decayInterproscan
GO:0000932
all species →		Cellular ComponentP-bodyInterproscan
GO:0017148
all species →		Biological Processnegative regulation of translationInterproscan
GO:0030015
all species →		Cellular ComponentCCR4-NOT core complexInterproscan
GO:0060090
all species →		Molecular Functionmolecular adaptor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for EVM0003206.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP