Gene detail

Detailed information of EVM0005467.1 in Myxobolus honghuensis

Genomic Location: Contig00331:592293...597273
NR annotation: KAF1742619.1, hypothetical protein MXB_3567, partial [Myxobolus squamalis]
Species Myxobolus honghuensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q54ZR7	Signal recognition particle receptor subunit alpha OS=Dictyostelium discoideum OX=44689 GN=srpra PE=3 SV=1
Q9U5L1	Signal recognition particle receptor subunit alpha homolog OS=Drosophila melanogaster OX=7227 GN=SrpRalpha PE=1 SV=2
Q9DBG7	Signal recognition particle receptor subunit alpha OS=Mus musculus OX=10090 GN=Srpra PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006629 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04086 all species →	SRP-alpha_N	Signal recognition particle, alpha subunit, N-terminal	Family	Interproscan
PF02881 all species →	SRP54_N	SRP54-type protein, helical bundle domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007222 all species →	Domain	Signal recognition particle receptor, alpha subunit, N-terminal	Interproscan
IPR013822 all species →	Domain	Signal recognition particle SRP54, helical bundle	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR042101 all species →	Homologous_superfamily	Signal recognition particle SRP54, N-terminal domain superfamily	Interproscan
IPR011012 all species →	Homologous_superfamily	Longin-like domain superfamily	Interproscan
IPR036225 all species →	Homologous_superfamily	SRP/SRP receptor, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43134 all species →	SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005047 all species →	Molecular Function	signal recognition particle binding	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0006605 all species →	Biological Process	protein targeting	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0045047 all species →	Biological Process	protein targeting to ER	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0005785 all species →	Cellular Component	signal recognition particle receptor complex	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0006614 all species →	Biological Process	SRP-dependent cotranslational protein targeting to membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for EVM0005467.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.