Gene detail

Detailed information of EVM0006910.1 in Myxobolus honghuensis

Genomic Location: Contig00922:972281...973057
NR annotation: KAF0987685.1, hypothetical protein HZS_182 [Henneguya salminicola]
Species Myxobolus honghuensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P34788	Small ribosomal subunit protein uS13z/uS13y/uS13x OS=Arabidopsis thaliana OX=3702 GN=RPS18A PE=1 SV=1
Q8IT98	Small ribosomal subunit protein uS13 OS=Argopecten irradians OX=31199 GN=RPS18 PE=2 SV=1
Q8JGS9	Small ribosomal subunit protein uS13 OS=Danio rerio OX=7955 GN=rps18 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006777 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00416 all species →	Ribosomal_S13	Ribosomal protein S13/S18	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010979 all species →	Homologous_superfamily	Small ribosomal subunit protein uS13-like, H2TH	Interproscan
IPR001892 all species →	Family	Small ribosomal subunit protein uS13	Interproscan
IPR027437 all species →	Homologous_superfamily	Small ribosomal subunit protein uS13, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10871 all species →	30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0015935 all species →	Cellular Component	small ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for EVM0006910.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.