Detailed information of EVM0007940.1 in Myxobolus honghuensis

Genomic Location: Contig00002:2328485...2340466
NR annotation: KII69961.1, Cactin [Thelohanellus kitauei]
Species Myxobolus honghuensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9VR99Splicing factor Cactin OS=Drosophila melanogaster OX=7227 GN=cactin PE=1 SV=3
Q9CS00Splicing factor Cactin OS=Mus musculus OX=10090 GN=Cactin PE=1 SV=2
G5EG14Splicing factor Cactin OS=Caenorhabditis elegans OX=6239 GN=cacn-1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005514 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10312
all species →
Cactin_midConserved mid region of cactinFamilyInterproscan
PF09732
all species →
CactinC_cactusCactus-binding C-terminus of cactin proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018816
all species →
DomainSplicing factor cactin, central domainInterproscan
IPR019134
all species →
DomainSplicing factor Cactin, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21737
all species →
POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005681
all species →
Cellular Componentspliceosomal complexInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0045292
all species →
Biological ProcessmRNA cis splicing, via spliceosomeInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for EVM0007940.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP