Gene detail

Detailed information of EVM0009868.1 in Myxobolus honghuensis

Genomic Location: Contig01067:229048...239332
NR annotation: KAF0991200.1, hypothetical protein HZS_7037 [Henneguya salminicola]
Species Myxobolus honghuensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

EVM0009868.1

ATGCCCGTTGGAATTGTCGATCTCGAGCTTTATTTTCCAAAACTTTGTGTGAACCAAAGTGATCTTGAAATCGTTGACAATTGCAAAGGGAAATACACGGCGGGATTAGGGCAGGCGACCATGGCGGTTCCTTCACTTTTGGAGGATTCCATCTCAATGGCCCTAACGGCAGTAAACCGCCTAATGCGGCGACATGGATCAAATTACACCATCATTGGGAGGCTGGATATTGGTACAGAATCCTCTGTAGATCTTTCAAAATCAATAAAATCAAATTTAATGATTTTGTTTGAAAAATCTAGAAATTTTTCAGTTCTTGGCGCCGATAATGTGAACGCGTGTTATGGCGGGACGGCTGCTGTTTTTAACACCATAAACTGGATACAAAGCGAAAACTGGGATGGAAAATTAGGCCTAGTTGTAGCTACGGATATTGCAGTTTACGGGAATGATGATCCTGGTGCACGCGCAACTGGTGGAGCATGTGCAATCAGTTTATTAATCGGAACTAATCCCATTATAGAAATGGAAAACACTATGGGGCATTTTATGGCGAATAATTACGATTTCTATAAACCCCTTAACCTAAAATTCCCAAAAGTCGACGGAAAACTTTCTTTAATAACATATATAAAATCTCTTATACACTGTTATGTAAATTTCAACCAAAAAATAACCAAAAATCAAAATTTTAACTTTTTTGAATATTTTGATTTCCTAGCATTCCATTCTCCATATACGAAATTAGCTAAAAAGAGTTTGTCTTATTTGTCATATTTTATAGCTGAAAATTCAGAATTATTATCAAAATATAACACAGAAACAGATTTACAAATACAATCATTACTGGATGATTTTATTGGGAAAATTGAACATTTTCATATGGATTCTGATCAGAAAAGTAGAATGGAATTTGAAAAATCTGCAAACGAAAAATTCAGTGATATCATTAAAGAGAAACTTGAAAATAGTCTGTTATTATCTCGGGATATTGGGAATTGCTATACTGCGTCTGTCTTTTTATGTCTTTTAAGTATTTTAAATACGCACGCGCTAGATGATTTGGTGGGAAAACGTATAGGGCTGTATTCGTATGGTTCTGGAAGTCTATCGTCGTTATATTCGATGAAAATAACATCGAATGCTGATAGAGTTAAAGAAATGGTTGAGAATGTTAAAAAACAGGTTTCATTTTTGGAGAAACGTAAAAATATTACACCAGAAGCAGTTTTTGAGATATCCGAAAGGCGTGTAGATTGTAAAGCTCTTTGTGAATCTGTAAACACTAAAAATGATCTCAATGATAATTCTGAGCTTGAAGAAAGGAATAAGCATTTGGTTGACCAGATTTTTAGACTTAAAAAAATAGTAAATTATGAATCAAATGAAAAAATTAATACCAGCGAATTTGAGGAAAAAATAGCGGACCTTGAGAAGAAATTGGCGGCCAAAACACAAGAATTACACAGTTTAGAAGAAAAAACAGATTCAATTAACTATGATTTGCAAAAAACCAGAAATAACTTAGAAGAACTCTCAAAGCACCATAAAGAAATGGCAGAAAAGGCGGAATTTTTAGAACGAACAAATTTACAACTTCTACAAAACTACAATGATTCAAAAAAAGAGAATAATGAAATAGTTGAAAAACTTAAATCAGAAATCGATGGCATTAGAAAACTATTAAACTCAAAAGAAATTGATTTAAATTTCTTAAAATACGGAATAATTCAAGATTTAGAGAATTCAATTTATGATTACCAAAAAATAACTATAGTTAATCAACAGAGAACTTTTTCATACAATAAAGCTTTAAGAAACAAGATTCAAGATTTTAGAACCCTGAAGAATCGATATGATTTAATGAATAAAAATTTAGGAAGACGAAAAAAGGATTTTTGGTCCCTAGCCTCCGACTGCGGCGACTCCAAGCTCGAAAGCGAGGCGCCAAATACTAATCAACCCGAAAATAAGGAAAACACTCTTCTCGTTGATTTGATGGTTAAAATAGGAAACCTTCAACAATCTAATTGGAATCTAGAAGAAACTATAGCTCATAATAAAAAAGATTTGAGAAATATTTCTGATGAATTGAAGCAAAAAAATTCAATTTTAGATTTGTTTTTGACGGCGATTGATTACAACTTAAATAAAACAGATCTTAATGTTGAATCACTTTCAGAATATCTAAAAAATAACCCAAAATTAAATCAAAAATTTATTGACAAAATGTGCGTATGTTGTCCTTTTTTCAGTTTAATCCGTTATCTAAGATATCTTGTTGCTTCTATGATACCCAGAAAAATTTAA

Transcript

EVM0009868.1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8JZK9	Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Hmgcs1 PE=1 SV=1
P17425	Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Hmgcs1 PE=1 SV=1
P54961	Hydroxymethylglutaryl-CoA synthase 1 OS=Blattella germanica OX=6973 GN=HMGCS-1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005551 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08540 all species →	HMG_CoA_synt_C	Hydroxymethylglutaryl-coenzyme A synthase C terminal	Domain	Interproscan
PF01154 all species →	HMG_CoA_synt_N	Hydroxymethylglutaryl-coenzyme A synthase N terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013746 all species →	Domain	Hydroxymethylglutaryl-coenzyme A synthase, C-terminal domain	Interproscan
IPR016039 all species →	Homologous_superfamily	Thiolase-like	Interproscan
IPR010122 all species →	Family	Hydroxymethylglutaryl-CoA synthase, eukaryotic	Interproscan
IPR013528 all species →	Domain	Hydroxymethylglutaryl-coenzyme A synthase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43323 all species →	3-HYDROXY-3-METHYLGLUTARYL COENZYME A SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004421 all species →	Molecular Function	hydroxymethylglutaryl-CoA synthase activity	Interproscan
GO:0006084 all species →	Biological Process	acetyl-CoA metabolic process	Interproscan
GO:0010142 all species →	Biological Process	farnesyl diphosphate biosynthetic process, mevalonate pathway	Interproscan
GO:0016746 all species →	Molecular Function	acyltransferase activity	Interproscan
GO:0008299 all species →	Biological Process	isoprenoid biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for EVM0009868.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.