Gene detail

Detailed information of EVM0010481.1 in Myxobolus honghuensis

Genomic Location: Contig00254:423909...427956
NR annotation: KII69650.1, TATA-binding protein-associated factor 172 [Thelohanellus kitauei]
Species abbreviation MHONG · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

EVM0010481.1

ATGAGTCAAAATTACGACGAATCAATCAGATTTCCAGCCTTTTTAATACTTTCTAGTTTTTTCAAACTTCTAGATTTGGAAATCAAAATTTTAGAAAGACAGATTGGAGGGAATGATCTTTCTAAAATTGAAGGATACTCTATGGATATTAAATATCGAGTCACGTGCTGCGATTTTTCATTTACGAAAATTAAAAACTTTTTCTCGCTTTCTCAATATCATAAAATTAAAGATTTTAAAGACCAGAATGCTAAGCGTAATGCGGATTTTAAAAATTTTTACAACGCTTTGGAAAAATTCCGATTTTATATTCAAGATAGATATTTGAAGAATTTTCCATTCATTTTTAATATATGTTACAGTTATGAATACATTCCAGAAAAAATAACGTCGATAGTTTTTGCGTTATTGGATCTTATTGTCCTTGACCCTTCCGCCTTTTTTATCGAATCGGCGATAAAATCTCTAGGAAAATTGACAATAGGAACAAAAACCCGGGAAAAGGCACCATATTCAAGAATTTTGTCCGTTTTAAGAGAAAAAGTTATTCAGTCCTATAGAATTTTGAATGATATTAAAATTGATTTAAACATAAAAATTAACGTCGTGGAAAAGGAATATATTATTGACCCTGTTAATGGAATATTTGGAATTACAAAAATTAGTTCTCAAGAAAAATGGAAAAACCGCAGAAAAGCCTTTCAGAAAATACTTTTTGTTCTAGAAGCCGAATTAGACCTTACAGAAACGATTAATGAACATTTTAGGATTTTTAACCAAAATCTTAAAAATCCAGAATTGATAATCAATGATCTTATTTTATACCTAGAAACTTCATTAACCGCTTTCAAAATAATCCCAAATACATATTTGGCCTCAAAATGTATAGCTTTTACATTTCCTCTTTTAGAAGAAAAAGAATATCAAGAGATTTTTTACACGAAAATGTATGAAATGTATGAAGATCCCAAATGCGAATTTTCCAGACAAGGAGTTTCAGATTTCTTATTAAATCTCATTTTTTACAATCAAAATAGGGAAGAATCTAATCTGGCTTTCCAAAATGAATTAAGCCTAAAAAATAATTTAATGATTAATAAACTGTTTAATCCCATAACTATTCCTGCCTATCATATACATTTTAAAATTCCCATCCAGCTTCGCGAATATCAACAATTCGGAGTTAGTTGGCTTCATTTTTTAAAAACCCTCAACCTGAATGGCGCGCTTTGTGATGATATGGGACTTGGTAAAACATTACAATCTCTCTGTGTTATTGCTGATGATCATATTCCTAAAAGAAATATGCATTCTTTAGTTGTCTGTCCTTCTATTTTAGTTAATCATTGGAAAAGCGAATGTTTGAAATATATTCCACAGGATATTTTAAAGCCCGATATACTTTCATTTAAATCAACACCAGAATGTTTCGAAAAAATAATTTCTTATCAAGAAGAACATTTATTAATTACATCTTATGATCAAATAAGAAAACATAAATGTTTTTCATCTATTTTTAAAGCTACTAAAGAATTAAATGCTTTACATAAAATAGCTTTAACAGGAACACCGATTCAGAATGGCGTTATGGAGTTATGGGCGATTTTTGATTTTTTAATGCCGTCGTTTTTAGGATCATATTCTCAATTTAAGAAAAAGTTTTCTAACAAAATTTCAAAGACAAAAAATTCTAAACGTACAGATGATGATGTTTTAAGCGGAATTAAGCTTCTAGAAAATTTGCATAAAAGATGTCTCCCTTTCATTCTTCGTAGAATGAAAAATGACGTTCTTAACGATTTACCTCCAAAAATTATACAAAATATTTTCTGTTATTTGACTCCGATCCAGAATATGATTTACAGATCACTAAGTTCAAACGATTTCGAAAATTTTATGTCTTCTATAAATACGATCGATACAGATATCAAGGATCAGCCATTCTTTAAAACTCTTTGCCAATTAAGAAAAGTCTGCTCTCATTTATCATATATCATCGAAAATCCTAGAGATCCAAGATTCAAACCCTATGTTTCTAACCCGAATATCTATGGAACGTGTAATAACACTAAATTGCGTGTTTTAAAAGACATTTTAGAATTTTGTGGATTTGAGAACATTAATAAAGATGAAACCCAGGATTCGGCGGAATATATTTATCCTCATAAAGTTATAGTATTTTGTCAACTACGCCAAACTGTAACAATAATTGAACAATTTTTACTCAGACCTGATTTTTCTCATCTTTCTTGGCTGAAATTGGACGGAAGTGTAAATTCTAATGATCGTTATGATATAGTTAATAAATTTAACGACGATCCTTCTATTGATATTTTAATTACAACTACTGCTATTGTGGGACTTGGTTTAAATCTCAGTTCTGCAGATGTTGTTATTTTTTACGATATTGATTGGAATCCGATGAAGGATTTGCAAGCGATGGACCGCGCGCATAGAATCGGACAACGTCGGACAGTTAATGTGTATAAGATTATCTGCAAAAATACAATCGAAGAACGTATTTTACAACTTCAAGAAATTAAAACGAAGATATTCGAGTCTGTTGTTTCGGCTGAAAATACCGCGCCAAAAATGGATCAAATTGTTGATTTGATGCAATATGAAAATGAAAAAAATAAAGATAATGATAAACTGAAGATGGATAGTTGGAAAGATTTGGACGAAGAATATGAAACATATTTAAACCTGGATTCATTTTTCGAAGGATTGAATAAATGA

Transcript

EVM0010481.1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O14981	TATA-binding protein-associated factor 172 OS=Homo sapiens OX=9606 GN=BTAF1 PE=1 SV=2
P32333	TATA-binding protein-associated factor MOT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MOT1 PE=1 SV=1
O43065	TATA-binding protein-associated factor mot1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mot1 PE=1 SV=4

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002291 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00176 all species →	SNF2-rel_dom	SNF2-related domain	Domain	Interproscan
PF00271 all species →	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000330 all species →	Domain	SNF2, N-terminal	Interproscan
IPR049730 all species →	Domain	SNF2/RAD5-like, C-terminal helicase domain	Interproscan
IPR001650 all species →	Domain	Helicase, C-terminal domain-like	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR038718 all species →	Homologous_superfamily	SNF2-like, N-terminal domain superfamily	Interproscan
IPR014001 all species →	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR044972 all species →	Family	TATA-binding protein-associated factor Mot1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR36498 all species →	TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0140658 all species →	Molecular Function	ATP-dependent chromatin remodeler activity	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0017025 all species →	Molecular Function	TBP-class protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15192	BTAF1, MOT1; TATA-binding protein-associated factor	EC:5.6.2.-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.