Detailed information of HOLI00001.G53997 in Hydra oligactis

Genomic Location: HOLI00001:6374025...6374742
NR annotation: HCN44863.1, di-trans,poly-cis-decaprenylcistransferase [Pseudomonas sp.]
Species abbreviation HOLIG · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q88MH6Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=uppS PE=3 SV=1
Q886N9Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=uppS PE=3 SV=1
Q9HXY2Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=uppS PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005865 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01255
all species →		PrenyltransfPutative undecaprenyl diphosphate synthaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036424
all species →		Homologous_superfamilyDecaprenyl diphosphate synthase-like superfamilyInterproscan
IPR001441
all species →		FamilyDecaprenyl diphosphate synthase-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10291
all species →		DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016765
all species →		Molecular Functiontransferase activity, transferring alkyl or aryl (other than methyl) groupsInterproscan
GO:0000287
all species →		Molecular Functionmagnesium ion bindingInterproscan
GO:0002094
all species →		Molecular Functionpolyprenyltransferase activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0008834
all species →		Molecular Functiondi-trans,poly-cis-undecaprenyl-diphosphate synthase activityInterproscan
GO:0016094
all species →		Biological Processpolyprenol biosynthetic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00806uppS; undecaprenyl diphosphate synthaseEC:2.5.1.31
Prenyltransferasesko01006deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP