Detailed information of HOLI00002.G18635 in Hydra oligactis

Genomic Location: HOLI00002:1581893...1583542
NR annotation: MBA4240264.1, excinuclease ABC subunit A [Sphingobacteriaceae bacterium]
Species abbreviation HOLIG · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8XNI5UvrABC system protein A OS=Clostridium perfringens (strain 13 / Type A) OX=195102 GN=uvrA PE=3 SV=1
O66911UvrABC system protein A OS=Aquifex aeolicus (strain VF5) OX=224324 GN=uvrA PE=3 SV=1
Q5HQW9UvrABC system protein A OS=Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A) OX=176279 GN=uvrA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010941 (this species only)

 Pfam domain
No Pfam domain signature was detected for HOLI00002.G18635. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003439
all species →		DomainABC transporter-like, ATP-binding domainInterproscan
IPR017871
all species →		Conserved_siteABC transporter-like, conserved siteInterproscan
IPR004602
all species →		FamilyUvrABC system subunit AInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43152
all species →		UVRABC SYSTEM PROTEIN AInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0016887
all species →		Molecular FunctionATP hydrolysis activityInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0006289
all species →		Biological Processnucleotide-excision repairInterproscan
GO:0009380
all species →		Cellular Componentexcinuclease repair complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K03701uvrA; excinuclease ABC subunit A-DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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