Gene detail

Detailed information of HOLI00002.G19006 in Hydra oligactis

Genomic Location: HOLI00002:2058374...2059461
NR annotation: MCD6020123.1, OmpA/MotB domain protein [Bacteroidota bacterium]
Species Hydra oligactis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q05146	Outer membrane protein A OS=Bordetella avium OX=521 GN=ompA PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0014204 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00691 all species →	OmpA	OmpA family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006665 all species →	Domain	OmpA-like domain	Interproscan
IPR006664 all species →	Domain	Outer membrane protein, bacterial	Interproscan
IPR050330 all species →	Family	Bacterial Outer Membrane Structural/Functional	Interproscan
IPR036737 all species →	Homologous_superfamily	OmpA-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR30329 all species →	STATOR ELEMENT OF FLAGELLAR MOTOR COMPLEX	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03286	TC.OOP; OmpA-OmpF porin, OOP family	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.