Detailed information of HOLI00002.G19074 in Hydra oligactis

Genomic Location: HOLI00002:2139406...2140278
NR annotation: MBC8033061.1, response regulator transcription factor [Chitinophagaceae bacterium]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P94514Sensory transduction protein LytT OS=Bacillus subtilis (strain 168) OX=224308 GN=lytT PE=3 SV=1
Q8EDD7Uncharacterized response regulatory protein SO_2823 OS=Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1) OX=211586 GN=SO_2823 PE=3 SV=1
Q8Z5C1Transcriptional regulatory protein BtsR OS=Salmonella typhi OX=90370 GN=btsR PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0030468 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00072
all species →		Response_regResponse regulator receiver domainDomainInterproscan
PF04397
all species →		LytTRLytTr DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007492
all species →		DomainLytTR DNA-binding domainInterproscan
IPR001789
all species →		DomainSignal transduction response regulator, receiver domainInterproscan
IPR011006
all species →		Homologous_superfamilyCheY-like superfamilyInterproscan
IPR051271
all species →		FamilyTwo-component system transcriptional regulatorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45526
all species →		TRANSCRIPTIONAL REGULATORY PROTEIN DPIAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0000160
all species →		Biological Processphosphorelay signal transduction systemInterproscan
GO:0000156
all species →		Molecular Functionphosphorelay response regulator activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI00002.G19074.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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