Detailed information of HOLI00002.G19078 in Hydra oligactis

Genomic Location: HOLI00002:2143291...2144262
NR annotation: MBL7934776.1, Gfo/Idh/MocA family oxidoreductase [Bacteroidia bacterium]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P77503D-glucoside 3-dehydrogenase OS=Escherichia coli (strain K12) OX=83333 GN=ycjS PE=1 SV=1
Q07982Glucose--fructose oxidoreductase OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) OX=264203 GN=gfo PE=1 SV=2
Q442581-carboxy-3-chloro-3,4-dihydroxycyclo hexa-1,5-diene dehydrogenase OS=Comamonas testosteroni OX=285 GN=cbaC PE=4 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008090 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02894
all species →		GFO_IDH_MocA_COxidoreductase family, C-terminal alpha/beta domainDomainInterproscan
PF01408
all species →		GFO_IDH_MocAOxidoreductase family, NAD-binding Rossmann foldFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004104
all species →		DomainGfo/Idh/MocA-like oxidoreductase, C-terminalInterproscan
IPR052515
all species →		FamilyGfo/Idh/MocA OxidoreductaseInterproscan
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR000683
all species →		DomainGfo/Idh/MocA-like oxidoreductase, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43249
all species →		UDP-N-ACETYL-2-AMINO-2-DEOXY-D-GLUCURONATE OXIDASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K13020wlbA, bplA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenaseEC:1.1.1.335
O-Antigen nucleotide sugar biosynthesisko00541deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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